Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.246440	Smbp	SM-11044 binding protein	19		107358
Mm.246440	1700008F19Rik	RIKEN cDNA 1700008F19 gene	19		75631
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 119 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 P8 Cb GC TCAAAATGTT (2) 9.8 0.0098 P8 Cb GC AAACATTGGG (3) 4.9 0.0049 P8 Cb GC CAGAATTGAA (5) 3.3 0.0033 P8 Cb GC GAATAAAAAA (7) 3.3 0.0033 P8 Cb GC AGTTACTTTT (5) 1.6 0.0016 P8 Cb GC GAATATATCT (2) 1.6 0.0016 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma TCAAAATGTT (2) 9.2 0.0092 Cb medulloblastoma AAACATTGGG (3) 6.9 0.0069 Cb medulloblastoma CAATGGTAGG (2) 2.3 0.0023 Cb medulloblastoma CAGAATTGAA (5) 2.3 0.0023 Cb medulloblastoma GAAACTGAAT (5) 2.3 0.0023 Cb medulloblastoma TTCATTAAGT (2) 2.3 0.0023 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+1d culture AAACATTGGG (3) 4.6 0.0046 P8 GC+1d culture CAGAATTGAA (5) 3.4 0.0034 P8 GC+1d culture TCAAAATGTT (2) 3.4 0.0034 P8 GC+1d culture GCTAATCTTC (4) 2.3 0.0023 P8 GC+1d culture GTGTTTGCCC (2) 2.3 0.0023 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture AAACATTGGG (3) 7 0.007 P8 GC+SHH+1d culture TCAAAATGTT (2) 7 0.007 P8 GC+SHH+1d culture GTGTTTGCCC (2) 3.5 0.0035 P8 GC+SHH+1d culture CAGAATTGAA (5) 2.3 0.0023 P8 GC+SHH+1d culture ACTAGTGCTT (80) 1.2 0.0012 3T3 fibroblasts AAACATTGGG (3) 10.5 0.0105 3T3 fibroblasts CAATGGTAGG (2) 3.5 0.0035 3T3 fibroblasts GTGTTTGCCC (2) 3.5 0.0035 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 E15 cortex GCTAATCTTC (4) 4.9 0.0049 E15 cortex GTGTTTGCCC (2) 4.9 0.0049 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 P1 cortex TGAAAATGTA (5) 22.7 0.0227 P1 cortex AAACATTGGG (3) 4.5 0.0045 P1 cortex TCAAAATGTT (2) 4.5 0.0045 Hypothalamus GAAAAAAAAA (204) 67 0.067 Hypothalamus TCAAAATGTT (2) 9.1 0.0091 Hypothalamus CAATGGTAGG (2) 3.6 0.0036 Hypothalamus AAACATTGGG (3) 1.8 0.0018 Hypothalamus GCTAATCTTC (4) 1.8 0.0018 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina AAACATTGGG (3) 15 0.015 E12.5 retina GTGTTTGCCC (2) 3.8 0.0038 E12.5 retina TCAAAATGTT (2) 3.8 0.0038 E12.5 retina ACTAGTGCTT (80) 1.9 0.0019 E12.5 retina CAGAATTGAA (5) 1.9 0.0019 E12.5 retina GAATAAAAAA (7) 1.9 0.0019 E12.5 retina GCTAATCTTC (4) 1.9 0.0019 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E14.5 retina TCAAAATGTT (2) 12.8 0.0128 E14.5 retina AAACATTGGG (3) 5.5 0.0055 E14.5 retina CAATGGTAGG (2) 1.8 0.0018 E14.5 retina CAGAATTGAA (5) 1.8 0.0018 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina TCAAAATGTT (2) 9.1 0.0091 E16.5 retina AAACATTGGG (3) 3.6 0.0036 E16.5 retina AGTTACTTTT (5) 3.6 0.0036 E16.5 retina GAAACTGAAT (5) 1.8 0.0018 E16.5 retina GAGATGTGTT (2) 1.8 0.0018 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 E18.5 retina TCAAAATGTT (2) 9.1 0.0091 E18.5 retina AAACATTGGG (3) 3.6 0.0036 E18.5 retina GAATAAAAAA (7) 1.8 0.0018 E18.5 retina GAATATATCT (2) 1.8 0.0018 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina AAGCTGGTGG (7) 3.9 0.0039 P0.5 retina CAATGGTAGG (2) 3.9 0.0039 P0.5 retina AAACATTGGG (3) 2 0.002 P0.5 retina AGTTACTTTT (5) 2 0.002 P0.5 retina TTCATTAAGT (2) 2 0.002 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P2.5 retina TCAAAATGTT (2) 8.8 0.0088 P2.5 retina AAACATTGGG (3) 5.3 0.0053 P2.5 retina AGTTACTTTT (5) 1.8 0.0018 P2.5 retina CAGAATTGAA (5) 1.8 0.0018 P2.5 retina GCTAATCTTC (4) 1.8 0.0018 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P4.5 retina TCAAAATGTT (2) 9.9 0.0099 P4.5 retina AAACATTGGG (3) 2 0.002 P4.5 retina ACTAGTGCTT (80) 2 0.002 P4.5 retina CAATGGTAGG (2) 2 0.002 P4.5 retina CAGAATTGAA (5) 2 0.002 P4.5 retina GAAACTGAAT (5) 2 0.002 P4.5 retina GAGATGTGTT (2) 2 0.002 P4.5 retina GTGTTTGCCC (2) 2 0.002 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina TCAAAATGTT (2) 10 0.01 P6.5 retina AAACATTGGG (3) 5 0.005 P6.5 retina CAGAATTGAA (5) 5 0.005 P6.5 retina CAATGGTAGG (2) 1.7 0.0017 P6.5 retina GAATATATCT (2) 1.7 0.0017 P6.5 retina TTCATTAAGT (2) 1.7 0.0017 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx- retina AAACATTGGG (3) 14.9 0.0149 P10.5 crx- retina TCAAAATGTT (2) 9.3 0.0093 P10.5 crx- retina CAATGGTAGG (2) 3.7 0.0037 P10.5 crx- retina GTGTTTGCCC (2) 3.7 0.0037 P10.5 crx- retina AGTTACTTTT (5) 1.9 0.0019 P10.5 crx- retina GAATATATCT (2) 1.9 0.0019 P10.5 crx- retina GAGATGTGTT (2) 1.9 0.0019 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 P10.5 crx+ retina TCAAAATGTT (2) 11.5 0.0115 P10.5 crx+ retina CAGAATTGAA (5) 5.8 0.0058 P10.5 crx+ retina GCTAATCTTC (4) 3.8 0.0038 P10.5 crx+ retina GTGTTTGCCC (2) 3.8 0.0038 P10.5 crx+ retina AGTTACTTTT (5) 1.9 0.0019 P10.5 crx+ retina GAGGTTTGTT (3) 1.9 0.0019 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 Adult retinal TCAAAATGTT (2) 3.7 0.0037 Adult retinal AAACATTGGG (3) 1.9 0.0019 Adult retinal AAGCTGGTGG (7) 1.9 0.0019 Adult retinal CAATGGTAGG (2) 1.9 0.0019 ONL GAAAAAAAAA (204) 24.9 0.0249 ONL AAACATTGGG (3) 9.6 0.0096 ONL AAGCTGGTGG (7) 1.9 0.0019 ONL AGTTACTTTT (5) 1.9 0.0019 ONL CAGAATTGAA (5) 1.9 0.0019 ONL TCAAAATGTT (2) 1.9 0.0019