Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.246520	Ccnd3	cyclin D3	17	17 C (17 28.8 cM)	12445
Gene Ontology	cell cycle | cyclin-dependent protein kinase activity | cyclin-dependent protein kinase regulator activity | nucleus | protein binding | regulation of cell cycle | signal transduction | T-cell proliferation
Human Homolog	CCND3[cyclin D3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 9 In Situ Hybridization Images

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SAGE Tags

Total 95 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCCGGGAAT (4) 316.5 0.3165 P8 Cb GC ATAGAAATGG 6.5 0.0065 P8 Cb GC CTGCCTTAAT (2) 3.3 0.0033 P8 Cb GC ATGGTCAGAG (4) 1.6 0.0016 P8 Cb GC GCAATCTGAA (2) 1.6 0.0016 P8 Cb GC GCAGGAGCCC (3) 1.6 0.0016 Cb medulloblastoma GCCCGGGAAT (4) 228.9 0.2289 Cb medulloblastoma CTGCCTTAAT (2) 9.2 0.0092 Cb medulloblastoma ATAGAAATGG 2.3 0.0023 P8 GC+1d culture GCCCGGGAAT (4) 238.6 0.2386 P8 GC+1d culture CTGCCTTAAT (2) 2.3 0.0023 P8 GC+1d culture ATAGAAATGG 1.1 0.0011 P8 GC+SHH+1d culture GCCCGGGAAT (4) 347.8 0.3478 P8 GC+SHH+1d culture CTGCCTTAAT (2) 8.2 0.0082 P8 GC+SHH+1d culture ATAGAAATGG 2.3 0.0023 P8 GC+SHH+1d culture GCAATCTGAA (2) 2.3 0.0023 P8 GC+SHH+1d culture GCAGGAGCCC (3) 2.3 0.0023 P8 GC+SHH+1d culture CGGAAGATGC 1.2 0.0012 3T3 fibroblasts GCCCGGGAAT (4) 105.1 0.1051 3T3 fibroblasts CTGCCTTAAT (2) 7 0.007 3T3 fibroblasts GCAGGAGCCC (3) 3.5 0.0035 E15 cortex GCCCGGGAAT (4) 207.8 0.2078 E15 cortex ATAGAAATGG 4.9 0.0049 E15 cortex CTGCCTTAAT (2) 4.9 0.0049 E15 cortex GCAATCTGAA (2) 4.9 0.0049 P1 cortex GCCCGGGAAT (4) 63.6 0.0636 P1 cortex AAATAAAAAC (10) 4.5 0.0045 P1 cortex CTGCCTTAAT (2) 4.5 0.0045 P1 cortex GCAATCTGAA (2) 4.5 0.0045 Hypothalamus GCCCGGGAAT (4) 320.6 0.3206 Hypothalamus CTGCCTTAAT (2) 3.6 0.0036 Hypothalamus CAGGGCTGCT (3) 1.8 0.0018 Hypothalamus GCAATCTGAA (2) 1.8 0.0018 E12.5 retina GCCCGGGAAT (4) 499.4 0.4994 E12.5 retina CTGCCTTAAT (2) 35.7 0.0357 E12.5 retina GCAATCTGAA (2) 3.8 0.0038 E12.5 retina AAATAAAAAC (10) 1.9 0.0019 E12.5 retina CGGAAGATGC 1.9 0.0019 E14.5 retina GCCCGGGAAT (4) 329.8 0.3298 E14.5 retina CTGCCTTAAT (2) 23.7 0.0237 E14.5 retina ATAGAAATGG 7.3 0.0073 E14.5 retina GCAATCTGAA (2) 3.6 0.0036 E14.5 retina CAGGGCTGCT (3) 1.8 0.0018 E16.5 retina GCCCGGGAAT (4) 273.5 0.2735 E16.5 retina GCAATCTGAA (2) 9.1 0.0091 E16.5 retina CAGGGCTGCT (3) 3.6 0.0036 E16.5 retina CTGCCTTAAT (2) 3.6 0.0036 E16.5 retina ATAGAAATGG 1.8 0.0018 E16.5 retina ATGGTCAGAG (4) 1.8 0.0018 E16.5 retina GGAAACTGAG (9) 1.8 0.0018 E18.5 retina GCCCGGGAAT (4) 603.9 0.6039 E18.5 retina CTGCCTTAAT (2) 18.2 0.0182 E18.5 retina ATAGAAATGG 3.6 0.0036 E18.5 retina GCAATCTGAA (2) 3.6 0.0036 P0.5 retina GCCCGGGAAT (4) 319.9 0.3199 P0.5 retina CTGCCTTAAT (2) 3.9 0.0039 P0.5 retina CGGAAGATGC 2 0.002 P0.5 retina GCAATCTGAA (2) 2 0.002 P0.5 retina GCAGGAGCCC (3) 2 0.002 P2.5 retina GCCCGGGAAT (4) 327.3 0.3273 P2.5 retina CTGCCTTAAT (2) 5.3 0.0053 P2.5 retina ATAGAAATGG 3.5 0.0035 P2.5 retina GCAATCTGAA (2) 3.5 0.0035 P2.5 retina AAATAAAAAC (10) 1.8 0.0018 P2.5 retina CAGGGCTGCT (3) 1.8 0.0018 P4.5 retina GCCCGGGAAT (4) 352.7 0.3527 P4.5 retina CTGCCTTAAT (2) 5.9 0.0059 P4.5 retina ATAGAAATGG 4 0.004 P4.5 retina ATGGTCAGAG (4) 2 0.002 P4.5 retina CAGGGCTGCT (3) 2 0.002 P4.5 retina CCCTATAAGT (2) 2 0.002 P6.5 retina GCCCGGGAAT (4) 225.1 0.2251 P6.5 retina CAGGGCTGCT (3) 8.3 0.0083 P6.5 retina ATAGAAATGG 6.7 0.0067 P6.5 retina CTGCCTTAAT (2) 3.3 0.0033 P6.5 retina GCAATCTGAA (2) 1.7 0.0017 P10.5 crx- retina GCCCGGGAAT (4) 50.2 0.0502 P10.5 crx- retina ATAGAAATGG 11.1 0.0111 P10.5 crx- retina CCCTATAAGT (2) 3.7 0.0037 P10.5 crx- retina CTGCCTTAAT (2) 3.7 0.0037 P10.5 crx- retina GCAATCTGAA (2) 3.7 0.0037 P10.5 crx+ retina GCCCGGGAAT (4) 246.1 0.2461 P10.5 crx+ retina AAATAAAAAC (10) 1.9 0.0019 P10.5 crx+ retina CTGCCTTAAT (2) 1.9 0.0019 P10.5 crx+ retina GCAATCTGAA (2) 1.9 0.0019 Adult retinal GCCCGGGAAT (4) 70.4 0.0704 Adult retinal CTGCCTTAAT (2) 5.6 0.0056 Adult retinal ATAGAAATGG 1.9 0.0019 Adult retinal GCAATCTGAA (2) 1.9 0.0019 ONL GCCCGGGAAT (4) 86.2 0.0862 ONL GGAAACTGAG (9) 9.6 0.0096 ONL CTGCCTTAAT (2) 3.8 0.0038 ONL ATAGAAATGG 1.9 0.0019 ONL CGGAAGATGC 1.9 0.0019 ONL GCAATCTGAA (2) 1.9 0.0019