Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.246552	Ptpn3	protein tyrosine phosphatase, non-receptor type 3	4	4 27.0 cM	19257
Gene Ontology	kinase activity | protein amino acid dephosphorylation | protein-tyrosine kinase activity | protein-tyrosine-phosphatase activity | receptor activity
Human Homolog	PTPN3[protein tyrosine phosphatase, non-receptor type 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 53 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC CAGATAGAGC (4) 1.6 0.0016 P8 Cb GC TTATTTTTTT (7) 1.6 0.0016 Cb medulloblastoma CAGATAGAGC (4) 11.6 0.0116 Cb medulloblastoma AATGCTCTAA 4.6 0.0046 Cb medulloblastoma TTATTTTTTT (7) 4.6 0.0046 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture CAGATAGAGC (4) 3.4 0.0034 P8 GC+1d culture GAAAAATGGG (3) 1.1 0.0011 P8 GC+1d culture TTATTTTTTT (7) 1.1 0.0011 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture CAGATAGAGC (4) 2.3 0.0023 P8 GC+SHH+1d culture TAATTTATTT (4) 2.3 0.0023 P8 GC+SHH+1d culture TTATTTTTTT (7) 1.2 0.0012 3T3 fibroblasts GAAAAATGGG (3) 3.5 0.0035 E15 cortex CAGATAGAGC (4) 4.9 0.0049 E15 cortex TTATTTTTTT (7) 4.9 0.0049 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus AATGCTCTAA 5.4 0.0054 Hypothalamus AATGCTCAAA (3) 1.8 0.0018 Hypothalamus CAGATAGAGC (4) 1.8 0.0018 Hypothalamus GAAAAATGGG (3) 1.8 0.0018 Hypothalamus TAATTTATTT (4) 1.8 0.0018 E12.5 retina CAGATAGAGC (4) 9.4 0.0094 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina CAGATAGAGC (4) 14.6 0.0146 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina CAGATAGAGC (4) 1.8 0.0018 E16.5 retina GAAAAATGGG (3) 1.8 0.0018 E16.5 retina TTATTTTTTT (7) 1.8 0.0018 E18.5 retina CAGATAGAGC (4) 12.7 0.0127 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina CAGATAGAGC (4) 3.9 0.0039 P2.5 retina CAGATAGAGC (4) 14.1 0.0141 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina AATGCTCAAA (3) 1.8 0.0018 P4.5 retina CAGATAGAGC (4) 11.9 0.0119 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina CAGATAGAGC (4) 6.7 0.0067 P10.5 crx- retina CAGATAGAGC (4) 9.3 0.0093 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 P10.5 crx+ retina CAGATAGAGC (4) 1.9 0.0019 Adult retinal CAGATAGAGC (4) 9.3 0.0093 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 ONL CAGATAGAGC (4) 7.7 0.0077 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL TAATTTATTT (4) 1.9 0.0019