Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.246875
Ddhd2
DDHD domain containing 2
8
72108
Mm.246875
D8Ertd317e
DNA segment, Chr 8, ERATO Doi 317, expressed
8
8 8.0 cM
52116
Mm.246875
6430710M23Rik
RIKEN cDNA 6430710M23 gene
8
76214
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 42 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CACACACACA (
106
)
11.4
0.0114
P8 Cb GC
AAAAAAATAT
(
13
)
1.6
0.0016
P8 Cb GC
CACAATCTCC
(
7
)
1.6
0.0016
Cb medulloblastoma
CACACACACA (
106
)
32.4
0.0324
Cb medulloblastoma
AAAAAAATAT
(
13
)
2.3
0.0023
P8 GC+1d culture
CACACACACA (
106
)
6.8
0.0068
P8 GC+1d culture
AATAAACACA
(
7
)
1.1
0.0011
P8 GC+1d culture
CACAATCTCC
(
7
)
1.1
0.0011
P8 GC+SHH+1d culture
CACACACACA (
106
)
9.4
0.0094
P8 GC+SHH+1d culture
AATAAACACA
(
7
)
3.5
0.0035
P8 GC+SHH+1d culture
CACAATCTCC
(
7
)
1.2
0.0012
3T3 fibroblasts
CACACACACA (
106
)
17.5
0.0175
3T3 fibroblasts
CACAATCTCC
(
7
)
10.5
0.0105
E15 cortex
CACACACACA (
106
)
4.9
0.0049
P1 cortex
CACACACACA (
106
)
27.3
0.0273
Hypothalamus
CACACACACA (
106
)
96
0.096
Hypothalamus
AATAAACACA
(
7
)
3.6
0.0036
E12.5 retina
CACACACACA (
106
)
3.8
0.0038
E12.5 retina
AATAAACACA
(
7
)
1.9
0.0019
E14.5 retina
CACACACACA (
106
)
18.2
0.0182
E16.5 retina
CACACACACA (
106
)
12.7
0.0127
E18.5 retina
CACACACACA (
106
)
5.5
0.0055
E18.5 retina
TACAGCTACA
(
5
)
1.8
0.0018
P0.5 retina
CACACACACA (
106
)
7.9
0.0079
P0.5 retina
CACAATCTCC
(
7
)
2
0.002
P2.5 retina
CACACACACA (
106
)
21.1
0.0211
P2.5 retina
AAAAAAATAT
(
13
)
1.8
0.0018
P4.5 retina
CACACACACA (
106
)
7.9
0.0079
P4.5 retina
CACAATCTCC
(
7
)
4
0.004
P6.5 retina
CACACACACA (
106
)
8.3
0.0083
P6.5 retina
AATAAACACA
(
7
)
1.7
0.0017
P6.5 retina
CACAATCTCC
(
7
)
1.7
0.0017
P6.5 retina
TACAGCTACA
(
5
)
1.7
0.0017
P10.5 crx- retina
CACACACACA (
106
)
5.6
0.0056
P10.5 crx- retina
CACAATCTCC
(
7
)
3.7
0.0037
P10.5 crx- retina
TACAGCTACA
(
5
)
1.9
0.0019
P10.5 crx+ retina
CACACACACA (
106
)
7.7
0.0077
P10.5 crx+ retina
AATAAACACA
(
7
)
1.9
0.0019
Adult retinal
CACACACACA (
106
)
16.7
0.0167
Adult retinal
TACAGCTACA
(
5
)
1.9
0.0019
ONL
CACACACACA (
106
)
21.1
0.0211
ONL
AAAAAAATAT
(
13
)
1.9
0.0019
