Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.247036	Xpa	xeroderma pigmentosum, complementation group A	4	4 21.5 cM	22590
Gene Ontology	damaged DNA binding | DNA binding | DNA repair | nucleotide-excision repair | nucleus | response to oxidative stress
Human Homolog	XPA[xeroderma pigmentosum, complementation group A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 22 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTAAGCAAGC (3) 1.6 0.0016 P8 Cb GC TACCGCAAGA 1.6 0.0016 Cb medulloblastoma TACCGCAAGA 2.3 0.0023 P8 GC+SHH+1d culture TACCGCAAGA 1.2 0.0012 3T3 fibroblasts CTAAGCAAGC (3) 3.5 0.0035 Hypothalamus TACCGCAAGA 3.6 0.0036 Hypothalamus CTAAGCAAGC (3) 1.8 0.0018 E12.5 retina TACCGCAAGA 3.8 0.0038 E14.5 retina TACCGCAAGA 7.3 0.0073 E14.5 retina GGGTGCTGAG 3.6 0.0036 E16.5 retina TACCGCAAGA 12.7 0.0127 E18.5 retina TACCGCAAGA 5.5 0.0055 P2.5 retina TACCGCAAGA 7 0.007 P4.5 retina TACCGCAAGA 5.9 0.0059 P6.5 retina TACCGCAAGA 1.7 0.0017 P10.5 crx- retina TACCGCAAGA 14.9 0.0149 P10.5 crx+ retina TACCGCAAGA 9.6 0.0096 P10.5 crx+ retina CTAAGCAAGC (3) 1.9 0.0019 Adult retinal TACCGCAAGA 5.6 0.0056 ONL CTAAGCAAGC (3) 1.9 0.0019 ONL GGGTGCTGAG 1.9 0.0019 ONL TACCGCAAGA 1.9 0.0019