Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.24765	Rnf20	ring finger protein 20	4	4 B1	109331
Human Homolog	RNF20[ring finger protein 20]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 11 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 74 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGTGATGCT (2) 9.8 0.0098 P8 Cb GC AAGCAGGGTC (2) 4.9 0.0049 P8 Cb GC TGCTTCAATT (4) 4.9 0.0049 P8 Cb GC AAGATGAGCT (4) 3.3 0.0033 P8 Cb GC CAGGAGCAGA (5) 1.6 0.0016 P8 Cb GC GAAATAACCA (2) 1.6 0.0016 P8 Cb GC TGTATATAAT (4) 1.6 0.0016 Cb medulloblastoma GTGTGATGCT (2) 4.6 0.0046 Cb medulloblastoma ACCTGGGAAC (3) 2.3 0.0023 Cb medulloblastoma TGCTTCAATT (4) 2.3 0.0023 P8 GC+1d culture TGCTTCAATT (4) 8 0.008 P8 GC+1d culture AAGCAGGGTC (2) 3.4 0.0034 P8 GC+1d culture GTGTGATGCT (2) 3.4 0.0034 P8 GC+1d culture ACCTGGGAAC (3) 1.1 0.0011 P8 GC+1d culture GAAATAACCA (2) 1.1 0.0011 P8 GC+SHH+1d culture TGCTTCAATT (4) 10.5 0.0105 P8 GC+SHH+1d culture GTGTGATGCT (2) 8.2 0.0082 P8 GC+SHH+1d culture AAGCAGGGTC (2) 2.3 0.0023 P8 GC+SHH+1d culture AAGATGAGCT (4) 1.2 0.0012 P8 GC+SHH+1d culture TGTATATAAT (4) 1.2 0.0012 3T3 fibroblasts GTGTGATGCT (2) 10.5 0.0105 3T3 fibroblasts GCACCCGGGG 7 0.007 3T3 fibroblasts CAGGAGCAGA (5) 3.5 0.0035 E15 cortex GCACCCGGGG 4.9 0.0049 E15 cortex GTGTGATGCT (2) 4.9 0.0049 E15 cortex TGCTTCAATT (4) 4.9 0.0049 P1 cortex AAGCAGGGTC (2) 4.5 0.0045 P1 cortex TGCTTCAATT (4) 4.5 0.0045 P1 cortex TGTATATAAT (4) 4.5 0.0045 Hypothalamus TGCTTCAATT (4) 7.2 0.0072 Hypothalamus AAGCAGGGTC (2) 1.8 0.0018 Hypothalamus GTGTGATGCT (2) 1.8 0.0018 E12.5 retina TGCTTCAATT (4) 9.4 0.0094 E12.5 retina AAGCAGGGTC (2) 5.6 0.0056 E12.5 retina CAGGAGCAGA (5) 1.9 0.0019 E14.5 retina TGCTTCAATT (4) 5.5 0.0055 E14.5 retina TGTATATAAT (4) 5.5 0.0055 E14.5 retina AAGCAGGGTC (2) 3.6 0.0036 E14.5 retina AAGATGAGCT (4) 1.8 0.0018 E14.5 retina ACCTGGGAAC (3) 1.8 0.0018 E14.5 retina GTGTGATGCT (2) 1.8 0.0018 E16.5 retina TGCTTCAATT (4) 9.1 0.0091 E16.5 retina GTGTGATGCT (2) 7.2 0.0072 E16.5 retina TGTATATAAT (4) 5.4 0.0054 E16.5 retina ACCTGGGAAC (3) 1.8 0.0018 E18.5 retina TGCTTCAATT (4) 20 0.02 E18.5 retina GTGTGATGCT (2) 7.3 0.0073 E18.5 retina TGTATATAAT (4) 3.6 0.0036 P0.5 retina GTGTGATGCT (2) 17.7 0.0177 P0.5 retina TGCTTCAATT (4) 5.9 0.0059 P0.5 retina AAGCAGGGTC (2) 3.9 0.0039 P0.5 retina GCACCCGGGG 2 0.002 P2.5 retina GTGTGATGCT (2) 22.9 0.0229 P2.5 retina TGCTTCAATT (4) 22.9 0.0229 P2.5 retina ACCTGGGAAC (3) 1.8 0.0018 P2.5 retina TGTATATAAT (4) 1.8 0.0018 P4.5 retina TGCTTCAATT (4) 11.9 0.0119 P4.5 retina GTGTGATGCT (2) 2 0.002 P4.5 retina TGTATATAAT (4) 2 0.002 P6.5 retina GTGTGATGCT (2) 10 0.01 P6.5 retina TGCTTCAATT (4) 10 0.01 P6.5 retina GAAATAACCA (2) 3.3 0.0033 P6.5 retina ACCTGGGAAC (3) 1.7 0.0017 P10.5 crx- retina GTGTGATGCT (2) 5.6 0.0056 P10.5 crx+ retina GTGTGATGCT (2) 11.5 0.0115 P10.5 crx+ retina TGCTTCAATT (4) 9.6 0.0096 P10.5 crx+ retina TGTATATAAT (4) 3.8 0.0038 P10.5 crx+ retina ACCTGGGAAC (3) 1.9 0.0019 P10.5 crx+ retina CAGGAGCAGA (5) 1.9 0.0019 Adult retinal GTGTGATGCT (2) 16.7 0.0167 Adult retinal TGCTTCAATT (4) 3.7 0.0037 Adult retinal ACCTGGGAAC (3) 1.9 0.0019 ONL TGCTTCAATT (4) 9.6 0.0096 ONL AAGCAGGGTC (2) 3.8 0.0038