Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.248049	Trim11	tripartite motif protein 11	11		94091
Gene Ontology	cytoplasm | intracellular | nucleus | protein ubiquitination | ubiquitin ligase complex | ubiquitin-protein ligase activity | zinc ion binding
Human Homolog	TRIM11[tripartite motif-containing 11]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 20 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGACCCCGGG (2) 3.3 0.0033 P8 Cb GC GCTGCCCCAG (5) 1.6 0.0016 Cb medulloblastoma GCTTCATCTC (2) 4.6 0.0046 P8 GC+1d culture AGACCCCGGG (2) 1.1 0.0011 P8 GC+1d culture GCCAAAGTTT (3) 1.1 0.0011 P8 GC+1d culture GCTGCCCCAG (5) 1.1 0.0011 P8 GC+1d culture GCTTCATCTC (2) 1.1 0.0011 P8 GC+SHH+1d culture AGACCCCGGG (2) 1.2 0.0012 P8 GC+SHH+1d culture GCCAAAGTTT (3) 1.2 0.0012 3T3 fibroblasts CCACACAGTC 3.5 0.0035 E15 cortex GCTGCCCCAG (5) 9.9 0.0099 P1 cortex GCTGCCCCAG (5) 4.5 0.0045 Hypothalamus GCTTCATCTC (2) 1.8 0.0018 E16.5 retina GCTGCCCCAG (5) 1.8 0.0018 E18.5 retina GCCAAAGTTT (3) 1.8 0.0018 P0.5 retina GCTTCATCTC (2) 27.5 0.0275 P0.5 retina CCACACAGTC 3.9 0.0039 P0.5 retina AGACCCCGGG (2) 2 0.002 P0.5 retina GCTGCCCCAG (5) 2 0.002 P4.5 retina AGACCCCGGG (2) 2 0.002