Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.248360
Anxa1
annexin A1
19
19 18.0 cM
16952
Mm.248360
C430014K04Rik
RIKEN cDNA C430014K04 gene
19
319730
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 55 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAACATTTCA (
5
)
4.9
0.0049
P8 Cb GC
GAGGGACTTG (
6
)
3.3
0.0033
P8 Cb GC
TTAATCCCAA (
4
)
3.3
0.0033
P8 Cb GC
GTGGCTCTGT (
8
)
1.6
0.0016
Cb medulloblastoma
TTAATCCCAA (
4
)
41.6
0.0416
Cb medulloblastoma
GAACATTTCA (
5
)
4.6
0.0046
Cb medulloblastoma
GTGGCTCTGT (
8
)
4.6
0.0046
Cb medulloblastoma
AAAGGACTTG
(
6
)
2.3
0.0023
P8 GC+1d culture
GAACATTTCA (
5
)
2.3
0.0023
P8 GC+1d culture
GTGGCTCTGT (
8
)
2.3
0.0023
P8 GC+1d culture
GGCTTAAGTA
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
GAGGGACTTG (
6
)
4.7
0.0047
P8 GC+SHH+1d culture
GAACATTTCA (
5
)
3.5
0.0035
P8 GC+SHH+1d culture
GTGGCTCTGT (
8
)
2.3
0.0023
P8 GC+SHH+1d culture
TTAATCCCAA (
4
)
2.3
0.0023
3T3 fibroblasts
GGCTTAAGTA
(
3
)
35
0.035
3T3 fibroblasts
GTGGCTCTGT (
8
)
3.5
0.0035
E15 cortex
GTGGCTCTGT (
8
)
4.9
0.0049
P1 cortex
GAGGGACTTG (
6
)
4.5
0.0045
Hypothalamus
TTAATCCCAA (
4
)
23.5
0.0235
Hypothalamus
GAGGGACTTG (
6
)
3.6
0.0036
E12.5 retina
GAACATTTCA (
5
)
11.3
0.0113
E14.5 retina
GAACATTTCA (
5
)
3.6
0.0036
E16.5 retina
GAACATTTCA (
5
)
5.4
0.0054
E18.5 retina
TTAATCCCAA (
4
)
12.7
0.0127
E18.5 retina
GAACATTTCA (
5
)
9.1
0.0091
P0.5 retina
TTAATCCCAA (
4
)
7.9
0.0079
P0.5 retina
GAACATTTCA (
5
)
3.9
0.0039
P0.5 retina
AAAGGACTTG
(
6
)
2
0.002
P0.5 retina
GCTCAGGGCC (
3
)
2
0.002
P0.5 retina
GTGGCTCTGT (
8
)
2
0.002
P2.5 retina
GAACATTTCA (
5
)
7
0.007
P2.5 retina
TTAATCCCAA (
4
)
5.3
0.0053
P2.5 retina
GAGGGACTTG (
6
)
1.8
0.0018
P2.5 retina
GTGGCTCTGT (
8
)
1.8
0.0018
P4.5 retina
TTAATCCCAA (
4
)
21.8
0.0218
P4.5 retina
GTGGCTCTGT (
8
)
4
0.004
P4.5 retina
GAGGGACTTG (
6
)
2
0.002
P6.5 retina
GAACATTTCA (
5
)
8.3
0.0083
P6.5 retina
GTGGCTCTGT (
8
)
3.3
0.0033
P6.5 retina
TTAATCCCAA (
4
)
3.3
0.0033
P6.5 retina
GAGGGACTTG (
6
)
1.7
0.0017
P6.5 retina
GGCTTAAGTA
(
3
)
1.7
0.0017
P10.5 crx- retina
GAGGGACTTG (
6
)
5.6
0.0056
P10.5 crx- retina
GAACATTTCA (
5
)
1.9
0.0019
P10.5 crx- retina
GTGGCTCTGT (
8
)
1.9
0.0019
P10.5 crx+ retina
GAACATTTCA (
5
)
9.6
0.0096
P10.5 crx+ retina
GTGGCTCTGT (
8
)
9.6
0.0096
P10.5 crx+ retina
GAGGGACTTG (
6
)
3.8
0.0038
P10.5 crx+ retina
AAAGGACTTG
(
6
)
1.9
0.0019
P10.5 crx+ retina
TTAATCCCAA (
4
)
1.9
0.0019
Adult retinal
GGCTTAAGTA
(
3
)
1.9
0.0019
ONL
GAACATTTCA (
5
)
3.8
0.0038
ONL
GGCTTAAGTA
(
3
)
1.9
0.0019
ONL
GTGGCTCTGT (
8
)
1.9
0.0019
