Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.248380	Tgfb1	transforming growth factor, beta 1	7	7 6.5 cM	21803
Gene Ontology	cell growth | cell proliferation | cell proliferation | defense response | extracellular matrix | extracellular space | growth | growth factor activity | inflammatory response | lymph gland development | myogenesis | necrosis | negative regulation of cell proliferation | organogenesis | protein amino acid phosphorylation | protein binding | regulation of cell cycle | regulation of cell proliferation | regulation of myogenesis | regulation of protein-nucleus import | skeletal development | transforming growth factor beta receptor binding | transforming growth factor beta receptor signaling pathway
Human Homolog	TGFB1[transforming growth factor, beta 1 (Camurati-Engelmann disease)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 39 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGCTGGTGA (8) 4.9 0.0049 P8 Cb GC CCCGCCTCGG (2) 1.6 0.0016 Cb medulloblastoma GAGCTGGTGA (8) 2.3 0.0023 P8 GC+1d culture GAGCTGGTGA (8) 12.6 0.0126 P8 GC+1d culture ATTGTGCGCT 2.3 0.0023 P8 GC+1d culture CCCGCCTCGG (2) 2.3 0.0023 P8 GC+1d culture TGGAACTCTA (4) 1.1 0.0011 P8 GC+SHH+1d culture GAGCTGGTGA (8) 4.7 0.0047 3T3 fibroblasts CCCGCCTCGG (2) 35 0.035 3T3 fibroblasts ATTGTGCGCT 3.5 0.0035 E15 cortex CCCGCCTCGG (2) 9.9 0.0099 E15 cortex GAGCTGGTGA (8) 4.9 0.0049 P1 cortex CCCGCCTCGG (2) 4.5 0.0045 Hypothalamus GAGCTGGTGA (8) 5.4 0.0054 Hypothalamus CCCGCCTCGG (2) 1.8 0.0018 Hypothalamus TGGAACTCTA (4) 1.8 0.0018 E12.5 retina GAGCTGGTGA (8) 9.4 0.0094 E14.5 retina CCCGCCTCGG (2) 1.8 0.0018 E14.5 retina GAGCTGGTGA (8) 1.8 0.0018 E16.5 retina GAGCTGGTGA (8) 5.4 0.0054 E16.5 retina CCCGCCTCGG (2) 1.8 0.0018 E16.5 retina TGGAACTCTA (4) 1.8 0.0018 E18.5 retina GAGCTGGTGA (8) 1.8 0.0018 E18.5 retina TCTAGGACGT 1.8 0.0018 P0.5 retina CCCGCCTCGG (2) 2 0.002 P0.5 retina GAGCTGGTGA (8) 2 0.002 P2.5 retina GAGCTGGTGA (8) 7 0.007 P2.5 retina CCCGCCTCGG (2) 3.5 0.0035 P4.5 retina GAGCTGGTGA (8) 5.9 0.0059 P4.5 retina CCCGCCTCGG (2) 2 0.002 P6.5 retina GAGCTGGTGA (8) 8.3 0.0083 P10.5 crx- retina GAGCTGGTGA (8) 13 0.013 P10.5 crx- retina CCCGCCTCGG (2) 1.9 0.0019 P10.5 crx+ retina GAGCTGGTGA (8) 3.8 0.0038 P10.5 crx+ retina CCCGCCTCGG (2) 1.9 0.0019 P10.5 crx+ retina TCTAGGACGT 1.9 0.0019 Adult retinal CCCGCCTCGG (2) 5.6 0.0056 Adult retinal TCTAGGACGT 1.9 0.0019 ONL GAGCTGGTGA (8) 7.7 0.0077