Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.248492	Sec23b	SEC23B (S. cerevisiae)	2		27054
Gene Ontology	COPII vesicle coat | endoplasmic reticulum | ER to Golgi transport | Golgi apparatus | intracellular protein transport | protein binding | protein transport | transport
Human Homolog	SEC23B[Sec23 homolog B (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 73 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC AAATTATATG (4) 1.6 0.0016 P8 Cb GC AGAGGCACCA (3) 1.6 0.0016 P8 Cb GC CCCTGTGCAG (3) 1.6 0.0016 P8 Cb GC CCTTCCCCAG (5) 1.6 0.0016 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma ATTTTCACCC (2) 6.9 0.0069 Cb medulloblastoma TGGATGAAAA (2) 4.6 0.0046 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture ATTTTCACCC (2) 2.3 0.0023 P8 GC+1d culture AAATTATATG (4) 1.1 0.0011 P8 GC+1d culture TCTTCCACTC (3) 1.1 0.0011 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture ATTTTCACCC (2) 3.5 0.0035 P8 GC+SHH+1d culture TCTTCCACTC (3) 2.3 0.0023 P8 GC+SHH+1d culture AAATTATATG (4) 1.2 0.0012 P8 GC+SHH+1d culture CTGCTCACTG (3) 1.2 0.0012 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts TCTTCCACTC (3) 7 0.007 3T3 fibroblasts CCCTGTGCAG (3) 3.5 0.0035 3T3 fibroblasts CCTTCCCCAG (5) 3.5 0.0035 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 E15 cortex ATTTTCACCC (2) 4.9 0.0049 E15 cortex TCTTCCACTC (3) 4.9 0.0049 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex TCTTCCACTC (3) 9.1 0.0091 P1 cortex AGAGGCACCA (3) 4.5 0.0045 P1 cortex CCCTGTGCAG (3) 4.5 0.0045 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus AGAGGCACCA (3) 1.8 0.0018 Hypothalamus CCTTCCCCAG (5) 1.8 0.0018 Hypothalamus CTGCTCACTG (3) 1.8 0.0018 Hypothalamus GTGATGGGAG (4) 1.8 0.0018 Hypothalamus TCTTCCACTC (3) 1.8 0.0018 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina AAATTATATG (4) 1.9 0.0019 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina AGAGGCACCA (3) 3.6 0.0036 E14.5 retina ATTTTCACCC (2) 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina AAATTATATG (4) 1.8 0.0018 E16.5 retina AGAGGCACCA (3) 1.8 0.0018 E16.5 retina ATTTTCACCC (2) 1.8 0.0018 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina AAATTATATG (4) 5.5 0.0055 E18.5 retina ATTTTCACCC (2) 3.6 0.0036 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina AGAGGCACCA (3) 5.9 0.0059 P0.5 retina CCCTGTGCAG (3) 5.9 0.0059 P0.5 retina TCTTCCACTC (3) 5.9 0.0059 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina ATTTTCACCC (2) 3.5 0.0035 P2.5 retina TCTTCCACTC (3) 1.8 0.0018 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina ATTTTCACCC (2) 5.9 0.0059 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina CCCTGTGCAG (3) 3.3 0.0033 P6.5 retina AAATTATATG (4) 1.7 0.0017 P6.5 retina ATTTTCACCC (2) 1.7 0.0017 P6.5 retina TGGATGAAAA (2) 1.7 0.0017 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina AAATTATATG (4) 5.6 0.0056 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina ATTTTCACCC (2) 3.8 0.0038 P10.5 crx+ retina GTGATGGGAG (4) 1.9 0.0019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal AAATTATATG (4) 1.9 0.0019 Adult retinal ATTTTCACCC (2) 1.9 0.0019 Adult retinal CTGCTCACTG (3) 1.9 0.0019 Adult retinal GTGATGGGAG (4) 1.9 0.0019 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL AAATTATATG (4) 1.9 0.0019 ONL TGGATGAAAA (2) 1.9 0.0019