Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.24862
AL022815
expressed sequence AL022815
15
105941
Mm.24862
Mkl1
MKL (megakaryoblastic leukemia)/myocardin-like 1
15
223701
Mm.24862
F730002C09Rik
RIKEN cDNA F730002C09 gene
319883
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 41 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGTCCCAGGG
(
6
)
1.6
0.0016
P8 Cb GC
TAGACACCTG
(
5
)
1.6
0.0016
Cb medulloblastoma
AGTCCCAGGG
(
6
)
6.9
0.0069
P8 GC+1d culture
AGCAGAGAAA (
9
)
4.6
0.0046
P8 GC+1d culture
GGCAGAGAAG (
5
)
2.3
0.0023
P8 GC+1d culture
AGTCCCAGGG
(
6
)
1.1
0.0011
P8 GC+1d culture
TAGACACCTG
(
5
)
1.1
0.0011
P8 GC+SHH+1d culture
TAGACACCTG
(
5
)
3.5
0.0035
P8 GC+SHH+1d culture
AGCAGAGAAA (
9
)
1.2
0.0012
P8 GC+SHH+1d culture
AGTCCCAGGG
(
6
)
1.2
0.0012
3T3 fibroblasts
AGTCCCAGGG
(
6
)
3.5
0.0035
E15 cortex
CCTGTGCGCA (
4
)
4.9
0.0049
E15 cortex
GGCAGAGAAG (
5
)
4.9
0.0049
P1 cortex
GGCAGAGAAG (
5
)
27.3
0.0273
P1 cortex
CCTGTGCGCA (
4
)
4.5
0.0045
Hypothalamus
AGTCCCAGGG
(
6
)
3.6
0.0036
E12.5 retina
AGTCCCAGGG
(
6
)
1.9
0.0019
E14.5 retina
AGTCCCAGGG
(
6
)
3.6
0.0036
E14.5 retina
AGCAGAGAAA (
9
)
1.8
0.0018
E16.5 retina
AGTCCCAGGG
(
6
)
7.2
0.0072
E18.5 retina
AGCAGAGAAA (
9
)
1.8
0.0018
E18.5 retina
AGTCCCAGGG
(
6
)
1.8
0.0018
P0.5 retina
CCTGTGCGCA (
4
)
3.9
0.0039
P0.5 retina
AGTCCCAGGG
(
6
)
2
0.002
P2.5 retina
AGCAGAGAAA (
9
)
3.5
0.0035
P2.5 retina
AGTCCCAGGG
(
6
)
3.5
0.0035
P2.5 retina
CCTGTGCGCA (
4
)
3.5
0.0035
P4.5 retina
AGCAGAGAAA (
9
)
2
0.002
P4.5 retina
CCTGTGCGCA (
4
)
2
0.002
P6.5 retina
AGTCCCAGGG
(
6
)
3.3
0.0033
P6.5 retina
GGCAGAGAAG (
5
)
3.3
0.0033
P6.5 retina
TAGACACCTG
(
5
)
3.3
0.0033
P10.5 crx- retina
GGCAGAGAAG (
5
)
5.6
0.0056
P10.5 crx- retina
AGTCCCAGGG
(
6
)
3.7
0.0037
P10.5 crx- retina
CCTGTGCGCA (
4
)
1.9
0.0019
P10.5 crx- retina
TAGACACCTG
(
5
)
1.9
0.0019
P10.5 crx+ retina
AGTCCCAGGG
(
6
)
1.9
0.0019
P10.5 crx+ retina
CCTGTGCGCA (
4
)
1.9
0.0019
P10.5 crx+ retina
GGCAGAGAAG (
5
)
1.9
0.0019
P10.5 crx+ retina
TAGACACCTG
(
5
)
1.9
0.0019
ONL
AGTCCCAGGG
(
6
)
7.7
0.0077
