Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.248637	Cdc26	cell division cycle 26	4		66440
Mm.248637	Slc31a1	solute carrier family 31, member 1	4		20529
Gene Ontology	carrier activity | copper ion transport | integral to membrane | integral to plasma membrane | transport
Human Homolog	SLC31A1[solute carrier family 31 (copper transporters), member 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 42 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAATAATAAA (8) 168 0.168 P8 Cb GC GCTATTTGCT (4) 1.6 0.0016 Cb medulloblastoma GAATAATAAA (8) 152.6 0.1526 P8 GC+1d culture GAATAATAAA (8) 147.3 0.1473 P8 GC+1d culture TTCCTCTCTC (5) 2.3 0.0023 P8 GC+1d culture CCATTTAATC (2) 1.1 0.0011 P8 GC+1d culture TGTTTCCCAT (3) 1.1 0.0011 P8 GC+SHH+1d culture GAATAATAAA (8) 165.1 0.1651 P8 GC+SHH+1d culture CCATTTAATC (2) 1.2 0.0012 P8 GC+SHH+1d culture CTGCTGTCTG (5) 1.2 0.0012 P8 GC+SHH+1d culture GCTATTTGCT (4) 1.2 0.0012 P8 GC+SHH+1d culture TTCCTCTCTC (5) 1.2 0.0012 3T3 fibroblasts GAATAATAAA (8) 7 0.007 E15 cortex GAATAATAAA (8) 9.9 0.0099 E15 cortex AGCATCTATG (4) 4.9 0.0049 P1 cortex GAATAATAAA (8) 113.6 0.1136 Hypothalamus GAATAATAAA (8) 193.8 0.1938 Hypothalamus GCTATTTGCT (4) 1.8 0.0018 E12.5 retina GAATAATAAA (8) 178.3 0.1783 E14.5 retina GAATAATAAA (8) 180.4 0.1804 E14.5 retina GCTATTTGCT (4) 9.1 0.0091 E14.5 retina CCATTTAATC (2) 1.8 0.0018 E16.5 retina GAATAATAAA (8) 99.6 0.0996 E16.5 retina AGCATCTATG (4) 5.4 0.0054 E16.5 retina GCTATTTGCT (4) 5.4 0.0054 E16.5 retina CTGCTGTCTG (5) 1.8 0.0018 E18.5 retina GAATAATAAA (8) 285.6 0.2856 P0.5 retina GAATAATAAA (8) 51 0.051 P0.5 retina CCATTTAATC (2) 2 0.002 P2.5 retina GAATAATAAA (8) 105.6 0.1056 P4.5 retina GAATAATAAA (8) 190.2 0.1902 P4.5 retina GCTATTTGCT (4) 2 0.002 P6.5 retina GAATAATAAA (8) 105 0.105 P6.5 retina CTGCTGTCTG (5) 3.3 0.0033 P10.5 crx- retina GAATAATAAA (8) 102.2 0.1022 P10.5 crx- retina GCTATTTGCT (4) 11.1 0.0111 P10.5 crx- retina TTCCTCTCTC (5) 1.9 0.0019 P10.5 crx+ retina GAATAATAAA (8) 48.1 0.0481 P10.5 crx+ retina GCTATTTGCT (4) 1.9 0.0019 Adult retinal GAATAATAAA (8) 11.1 0.0111 ONL GAATAATAAA (8) 47.9 0.0479 ONL TGTTTCCCAT (3) 1.9 0.0019