Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.248755	Crnkl1	Crn, crooked neck-like 1 (Drosophila)	2		66877
Gene Ontology	molecular_function unknown | nuclear mRNA splicing, via spliceosome | spliceosome complex
Human Homolog	CRNKL1[Crn, crooked neck-like 1 (Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 45 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCAAGCTGT (5) 6.5 0.0065 P8 Cb GC CTCTTCAACC (6) 3.3 0.0033 P8 GC+1d culture TTTGAATTAT (4) 6.8 0.0068 P8 GC+1d culture GCCAAGCTGT (5) 2.3 0.0023 P8 GC+1d culture TTTGTTTTTC (4) 1.1 0.0011 P8 GC+SHH+1d culture GCCAAGCTGT (5) 2.3 0.0023 P8 GC+SHH+1d culture CCTCAGAATG (2) 1.2 0.0012 P8 GC+SHH+1d culture GCAAGCTGTG (3) 1.2 0.0012 P8 GC+SHH+1d culture TTTGAATTAT (4) 1.2 0.0012 P8 GC+SHH+1d culture TTTGTTTTTC (4) 1.2 0.0012 3T3 fibroblasts GCCAAGCTGT (5) 7 0.007 3T3 fibroblasts GCAGCCTCCA (3) 3.5 0.0035 E15 cortex GCAAGCTGTG (3) 4.9 0.0049 E15 cortex GCCAAGCTGT (5) 4.9 0.0049 Hypothalamus GCAGCCTCCA (3) 3.6 0.0036 Hypothalamus CTCTTCAACC (6) 1.8 0.0018 Hypothalamus GCCAAGCTGT (5) 1.8 0.0018 Hypothalamus TTTGAATTAT (4) 1.8 0.0018 E12.5 retina GCCAAGCTGT (5) 3.8 0.0038 E14.5 retina GCAGCCTCCA (3) 1.8 0.0018 E14.5 retina GCCAAGCTGT (5) 1.8 0.0018 E16.5 retina GCAGCCTCCA (3) 3.6 0.0036 E16.5 retina GCCAAGCTGT (5) 1.8 0.0018 E18.5 retina GCAGCCTCCA (3) 1.8 0.0018 P0.5 retina CTCTTCAACC (6) 2 0.002 P2.5 retina TTTGAATTAT (4) 3.5 0.0035 P2.5 retina CCTCAGAATG (2) 1.8 0.0018 P2.5 retina GCCAAGCTGT (5) 1.8 0.0018 P4.5 retina GCCAAGCTGT (5) 2 0.002 P4.5 retina TTTGTTTTTC (4) 2 0.002 P6.5 retina CTCTTCAACC (6) 3.3 0.0033 P6.5 retina GCCAAGCTGT (5) 3.3 0.0033 P6.5 retina TTTGAATTAT (4) 3.3 0.0033 P6.5 retina CCTCAGAATG (2) 1.7 0.0017 P6.5 retina GCAAGCTGTG (3) 1.7 0.0017 P10.5 crx- retina GCAAGCTGTG (3) 1.9 0.0019 P10.5 crx- retina GCCAAGCTGT (5) 1.9 0.0019 P10.5 crx- retina TTTGAATTAT (4) 1.9 0.0019 P10.5 crx- retina TTTGTTTTTC (4) 1.9 0.0019 P10.5 crx+ retina GCAGCCTCCA (3) 1.9 0.0019 P10.5 crx+ retina GCCAAGCTGT (5) 1.9 0.0019 Adult retinal GCAGCCTCCA (3) 1.9 0.0019 Adult retinal GCCAAGCTGT (5) 1.9 0.0019 Adult retinal TTTGAATTAT (4) 1.9 0.0019 ONL TTTGAATTAT (4) 1.9 0.0019