Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.248788
Dbccr1
deleted in bladder cancer chromosome region candidate 1 (human)
4
56710
Mm.248788
9330154F10Rik
RIKEN cDNA 9330154F10 gene
4
77554
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 43 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AACGGGAGGT (
4
)
4.9
0.0049
P8 Cb GC
AAGAAGGGTC
(
2
)
1.6
0.0016
P8 Cb GC
AGATCCAGAT
(
4
)
1.6
0.0016
P8 Cb GC
GGCTTCCTCT (
7
)
1.6
0.0016
Cb medulloblastoma
AACGGGAGGT (
4
)
27.7
0.0277
Cb medulloblastoma
TGCAGCCTGG (
5
)
2.3
0.0023
P8 GC+1d culture
AACGGGAGGT (
4
)
17.1
0.0171
P8 GC+1d culture
TGCAGCCTGG (
5
)
2.3
0.0023
P8 GC+1d culture
AAGAAGGGTC
(
2
)
1.1
0.0011
P8 GC+1d culture
AGATCCAGAT
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
AACGGGAGGT (
4
)
7
0.007
P8 GC+SHH+1d culture
AAGAAGGGTC
(
2
)
1.2
0.0012
3T3 fibroblasts
AGATCCAGAT
(
4
)
3.5
0.0035
3T3 fibroblasts
GCCAAGGCCT
(
8
)
3.5
0.0035
3T3 fibroblasts
GGCTTCCTCT (
7
)
3.5
0.0035
E15 cortex
AACGGGAGGT (
4
)
29.7
0.0297
E15 cortex
GCCAAGGCCT
(
8
)
4.9
0.0049
P1 cortex
AACGGGAGGT (
4
)
9.1
0.0091
P1 cortex
GCCAAGGCCT
(
8
)
9.1
0.0091
P1 cortex
AAGAAGGGTC
(
2
)
4.5
0.0045
Hypothalamus
AACGGGAGGT (
4
)
14.5
0.0145
E12.5 retina
AACGGGAGGT (
4
)
3.8
0.0038
E14.5 retina
AACGGGAGGT (
4
)
9.1
0.0091
E16.5 retina
AACGGGAGGT (
4
)
5.4
0.0054
E18.5 retina
AACGGGAGGT (
4
)
3.6
0.0036
P0.5 retina
AACGGGAGGT (
4
)
5.9
0.0059
P0.5 retina
GCCAAGGCCT
(
8
)
2
0.002
P2.5 retina
AGATCCAGAT
(
4
)
1.8
0.0018
P2.5 retina
GCCAAGGCCT
(
8
)
1.8
0.0018
P4.5 retina
AACGGGAGGT (
4
)
7.9
0.0079
P4.5 retina
GCCAAGGCCT
(
8
)
2
0.002
P6.5 retina
AACGGGAGGT (
4
)
10
0.01
P10.5 crx- retina
AACGGGAGGT (
4
)
53.9
0.0539
P10.5 crx- retina
AGATCCAGAT
(
4
)
1.9
0.0019
P10.5 crx+ retina
AACGGGAGGT (
4
)
13.5
0.0135
P10.5 crx+ retina
AGATCCAGAT
(
4
)
1.9
0.0019
P10.5 crx+ retina
GGCTTCCTCT (
7
)
1.9
0.0019
Adult retinal
AACGGGAGGT (
4
)
16.7
0.0167
Adult retinal
AGATCCAGAT
(
4
)
1.9
0.0019
Adult retinal
GCCAAGGCCT
(
8
)
1.9
0.0019
Adult retinal
GGCTTCCTCT (
7
)
1.9
0.0019
ONL
AGATCCAGAT
(
4
)
3.8
0.0038
ONL
GGCTTCCTCT (
7
)
1.9
0.0019
