Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.249637	Efnb3	ephrin B3	11	11 40.0 cM	13643
Gene Ontology	adult walking behavior | axon choice point recognition | axon guidance | development | extracellular space | integral to membrane | membrane | neurogenesis
Human Homolog	EFNB3[ephrin-B3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 49 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTCTCCCCAC (3) 13.1 0.0131 P8 Cb GC GACCACCTCT (2) 3.3 0.0033 P8 Cb GC TTGGCCACCT (3) 3.3 0.0033 P8 Cb GC CTTGGAGCTG (3) 1.6 0.0016 Cb medulloblastoma TTGGCCACCT (3) 4.6 0.0046 Cb medulloblastoma TTCTCCCCAC (3) 2.3 0.0023 P8 GC+1d culture TTCTCCCCAC (3) 3.4 0.0034 P8 GC+1d culture TTGGCCACCT (3) 3.4 0.0034 P8 GC+SHH+1d culture TTCTCCCCAC (3) 16.4 0.0164 P8 GC+SHH+1d culture GACCACCTCT (2) 1.2 0.0012 P8 GC+SHH+1d culture TTGGCCACCT (3) 1.2 0.0012 3T3 fibroblasts GACCACCTCT (2) 3.5 0.0035 E15 cortex GACCACCTCT (2) 19.8 0.0198 E15 cortex CTTGGAGCTG (3) 4.9 0.0049 P1 cortex TTGGCCACCT (3) 13.6 0.0136 P1 cortex GACCACCTCT (2) 4.5 0.0045 Hypothalamus TTGGCCACCT (3) 5.4 0.0054 Hypothalamus GACCACCTCT (2) 3.6 0.0036 E12.5 retina GACCACCTCT (2) 26.3 0.0263 E12.5 retina TTCTCCCCAC (3) 15 0.015 E12.5 retina ATGGCCAAGG 1.9 0.0019 E14.5 retina TTCTCCCCAC (3) 16.4 0.0164 E14.5 retina GACCACCTCT (2) 9.1 0.0091 E16.5 retina TTCTCCCCAC (3) 12.7 0.0127 E16.5 retina GACCACCTCT (2) 10.9 0.0109 E16.5 retina TTGGCCACCT (3) 3.6 0.0036 E16.5 retina ATGGCCAAGG 1.8 0.0018 E18.5 retina GACCACCTCT (2) 18.2 0.0182 E18.5 retina TTCTCCCCAC (3) 14.6 0.0146 E18.5 retina TTGGCCACCT (3) 5.5 0.0055 P0.5 retina GACCACCTCT (2) 19.6 0.0196 P0.5 retina TTCTCCCCAC (3) 19.6 0.0196 P0.5 retina TTGGCCACCT (3) 5.9 0.0059 P0.5 retina CTTGGAGCTG (3) 2 0.002 P2.5 retina GACCACCTCT (2) 29.9 0.0299 P2.5 retina TTCTCCCCAC (3) 10.6 0.0106 P2.5 retina CTTGGAGCTG (3) 1.8 0.0018 P4.5 retina GACCACCTCT (2) 51.5 0.0515 P4.5 retina TTCTCCCCAC (3) 5.9 0.0059 P4.5 retina ATGGCCAAGG 2 0.002 P4.5 retina TTGGCCACCT (3) 2 0.002 P6.5 retina GACCACCTCT (2) 11.7 0.0117 P6.5 retina TTCTCCCCAC (3) 1.7 0.0017 P6.5 retina TTGGCCACCT (3) 1.7 0.0017 P10.5 crx- retina GACCACCTCT (2) 9.3 0.0093 P10.5 crx- retina TTGGCCACCT (3) 3.7 0.0037 P10.5 crx+ retina GACCACCTCT (2) 3.8 0.0038 Adult retinal ATGGCCAAGG 1.9 0.0019 ONL GACCACCTCT (2) 1.9 0.0019