Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.249966	Rela	v-rel reticuloendotheliosis viral oncogene homolog A (avian)	19	19 0.5 cM	19697
Gene Ontology	cell growth and/or maintenance | cytoplasm | defense response | DNA binding | nucleus | organogenesis | positive regulation of interleukin-12 biosynthesis | positive regulation of transcription, DNA-dependent | protein binding | regulation of cell cycle | regulation of transcription, DNA-dependent | transcription factor activity | transcriptional activator activity
Human Homolog	RELA[v-rel reticuloendotheliosis viral oncogene homolog A, nuclear factor of kappa light polypeptide gene enhancer in B-cells 3, p65 (avian)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 62 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC CTGAGCTGTG (3) 1.6 0.0016 P8 Cb GC GCTCCAGCTC (5) 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma CTGAGCTGTG (3) 4.6 0.0046 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture CTGAGCTGTG (3) 4.6 0.0046 P8 GC+1d culture GCTCCAGCTC (5) 4.6 0.0046 P8 GC+1d culture TCTCACCCAC (3) 2.3 0.0023 P8 GC+1d culture AGCTCTATCT 1.1 0.0011 P8 GC+1d culture GCCTCCAGCT (8) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture CTGAGCTGTG (3) 5.9 0.0059 P8 GC+SHH+1d culture CAGCTACGGC (7) 1.2 0.0012 P8 GC+SHH+1d culture GCCTCCAGCT (8) 1.2 0.0012 P8 GC+SHH+1d culture GCTCCAGCTC (5) 1.2 0.0012 P8 GC+SHH+1d culture TCTCACCCAC (3) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts CTGAGCTGTG (3) 3.5 0.0035 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex CTGAGCTGTG (3) 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex AGCTCTATCT 4.5 0.0045 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus GCCTCCAGCT (8) 3.6 0.0036 Hypothalamus TCTCACCCAC (3) 1.8 0.0018 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina CTGAGCTGTG (3) 1.9 0.0019 E12.5 retina GCCTCCAGCT (8) 1.9 0.0019 E12.5 retina TCTCACCCAC (3) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina GCCTCCAGCT (8) 3.6 0.0036 E14.5 retina GCTCCAGCTC (5) 1.8 0.0018 E14.5 retina TCTCACCCAC (3) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina CTGAGCTGTG (3) 1.8 0.0018 E16.5 retina GCCTCCAGCT (8) 1.8 0.0018 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina GCTCCAGCTC (5) 5.9 0.0059 P0.5 retina AGCTCTATCT 2 0.002 P0.5 retina TCTCACCCAC (3) 2 0.002 P0.5 retina TCTTCACTCC (7) 2 0.002 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina CTGAGCTGTG (3) 3.5 0.0035 P2.5 retina TCTTCACTCC (7) 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina CAGCTACGGC (7) 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina GCTCCAGCTC (5) 3.3 0.0033 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina CTGAGCTGTG (3) 1.9 0.0019 P10.5 crx- retina GCTCCAGCTC (5) 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina CAGCTACGGC (7) 3.8 0.0038 P10.5 crx+ retina CTGAGCTGTG (3) 3.8 0.0038 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal CTGAGCTGTG (3) 7.4 0.0074 Adult retinal GCTCCAGCTC (5) 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL GCTCCAGCTC (5) 1.9 0.0019 ONL TCTTCACTCC (7) 1.9 0.0019