Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.250552
2410017P09Rik
RIKEN cDNA 2410017P09 gene
12
69709
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 65 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTTTCCCTGC
(
4
)
47.3
0.0473
P8 Cb GC
CCATTTTCTG (
5
)
11.4
0.0114
P8 Cb GC
TGAACCTGAA (
6
)
4.9
0.0049
P8 Cb GC
TGGGAAGTGT (
8
)
3.3
0.0033
P8 Cb GC
CATAGCCCTG
(
2
)
1.6
0.0016
Cb medulloblastoma
CATAGCCCTG
(
2
)
4.6
0.0046
Cb medulloblastoma
CCATTTTCTG (
5
)
2.3
0.0023
Cb medulloblastoma
TGGGAAGTGT (
8
)
2.3
0.0023
P8 GC+1d culture
CTTTCCCTGC
(
4
)
21.7
0.0217
P8 GC+1d culture
TGGGAAGTGT (
8
)
20.5
0.0205
P8 GC+1d culture
TGAACCTGAA (
6
)
6.8
0.0068
P8 GC+1d culture
CCATTTTCTG (
5
)
2.3
0.0023
P8 GC+1d culture
CATAGCCCTG
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
CTTTCCCTGC
(
4
)
37.5
0.0375
P8 GC+SHH+1d culture
TGGGAAGTGT (
8
)
8.2
0.0082
P8 GC+SHH+1d culture
TGAACCTGAA (
6
)
5.9
0.0059
P8 GC+SHH+1d culture
CCATTTTCTG (
5
)
3.5
0.0035
3T3 fibroblasts
CTTTCCCTGC
(
4
)
49.1
0.0491
3T3 fibroblasts
TGGGAAGTGT (
8
)
10.5
0.0105
3T3 fibroblasts
TGAACCTGAA (
6
)
3.5
0.0035
E15 cortex
CTTTCCCTGC
(
4
)
19.8
0.0198
E15 cortex
CCATTTTCTG (
5
)
4.9
0.0049
E15 cortex
TGAACCTGAA (
6
)
4.9
0.0049
E15 cortex
TGGGAAGTGT (
8
)
4.9
0.0049
P1 cortex
TGGGAAGTGT (
8
)
18.2
0.0182
P1 cortex
CATAGCCCTG
(
2
)
4.5
0.0045
Hypothalamus
TGGGAAGTGT (
8
)
3.6
0.0036
Hypothalamus
TGAACCTGAA (
6
)
1.8
0.0018
E12.5 retina
CCATTTTCTG (
5
)
11.3
0.0113
E12.5 retina
CTTTCCCTGC
(
4
)
11.3
0.0113
E12.5 retina
TGGGAAGTGT (
8
)
9.4
0.0094
E12.5 retina
TGAACCTGAA (
6
)
3.8
0.0038
E14.5 retina
TGGGAAGTGT (
8
)
12.8
0.0128
E14.5 retina
CTTTCCCTGC
(
4
)
5.5
0.0055
E14.5 retina
TGAACCTGAA (
6
)
5.5
0.0055
E16.5 retina
CCATTTTCTG (
5
)
10.9
0.0109
E16.5 retina
TGAACCTGAA (
6
)
7.2
0.0072
E16.5 retina
TGGGAAGTGT (
8
)
5.4
0.0054
E16.5 retina
CTTTCCCTGC
(
4
)
3.6
0.0036
E18.5 retina
TGAACCTGAA (
6
)
7.3
0.0073
E18.5 retina
TGGGAAGTGT (
8
)
7.3
0.0073
E18.5 retina
CCATTTTCTG (
5
)
1.8
0.0018
E18.5 retina
CTTTCCCTGC
(
4
)
1.8
0.0018
P0.5 retina
CCATTTTCTG (
5
)
3.9
0.0039
P0.5 retina
CTTTCCCTGC
(
4
)
3.9
0.0039
P0.5 retina
TGGGAAGTGT (
8
)
3.9
0.0039
P2.5 retina
TGGGAAGTGT (
8
)
5.3
0.0053
P2.5 retina
TGAACCTGAA (
6
)
3.5
0.0035
P2.5 retina
CTTTCCCTGC
(
4
)
1.8
0.0018
P4.5 retina
CCATTTTCTG (
5
)
9.9
0.0099
P4.5 retina
TGAACCTGAA (
6
)
7.9
0.0079
P4.5 retina
CTTTCCCTGC
(
4
)
2
0.002
P6.5 retina
CCATTTTCTG (
5
)
8.3
0.0083
P6.5 retina
CTTTCCCTGC
(
4
)
3.3
0.0033
P6.5 retina
TGAACCTGAA (
6
)
3.3
0.0033
P10.5 crx- retina
CATAGCCCTG
(
2
)
3.7
0.0037
P10.5 crx- retina
TGGGAAGTGT (
8
)
3.7
0.0037
P10.5 crx- retina
CTTTCCCTGC
(
4
)
1.9
0.0019
P10.5 crx- retina
TGAACCTGAA (
6
)
1.9
0.0019
P10.5 crx+ retina
TGAACCTGAA (
6
)
3.8
0.0038
P10.5 crx+ retina
TGGGAAGTGT (
8
)
3.8
0.0038
P10.5 crx+ retina
CTTTCCCTGC
(
4
)
1.9
0.0019
Adult retinal
TGAACCTGAA (
6
)
5.6
0.0056
Adult retinal
TGGGAAGTGT (
8
)
5.6
0.0056
ONL
TGAACCTGAA (
6
)
3.8
0.0038
