Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.252034
Auh
AU RNA binding protein/enoyl-coenzyme A hydratase
13
11992
Mm.252034
C77140
expressed sequence C77140
13
97853
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 87 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAAAAAAAAA (
157
)
47.3
0.0473
P8 Cb GC
GCGGCGGCGG
(
24
)
6.5
0.0065
P8 Cb GC
GGAAATGCAG (
7
)
3.3
0.0033
P8 Cb GC
GGGGTTAAGA (
5
)
3.3
0.0033
P8 Cb GC
CTGCATTAAG
(
4
)
1.6
0.0016
Cb medulloblastoma
CAAAAAAAAA (
157
)
92.5
0.0925
Cb medulloblastoma
CTGCATTAAG
(
4
)
16.2
0.0162
Cb medulloblastoma
GCGGCGGCGG
(
24
)
4.6
0.0046
Cb medulloblastoma
GCGGCGGGGG (
8
)
2.3
0.0023
Cb medulloblastoma
GGGGTTAAGA (
5
)
2.3
0.0023
P8 GC+1d culture
CAAAAAAAAA (
157
)
37.7
0.0377
P8 GC+1d culture
GCGGCGGCGG
(
24
)
4.6
0.0046
P8 GC+1d culture
CTGCATTAAG
(
4
)
3.4
0.0034
P8 GC+1d culture
GGGGTTAAGA (
5
)
3.4
0.0034
P8 GC+1d culture
GGAAATGCAG (
7
)
2.3
0.0023
P8 GC+SHH+1d culture
CAAAAAAAAA (
157
)
58.5
0.0585
P8 GC+SHH+1d culture
CTGCATTAAG
(
4
)
17.6
0.0176
P8 GC+SHH+1d culture
GCGGCGGCGG
(
24
)
16.4
0.0164
P8 GC+SHH+1d culture
GGAAATGCAG (
7
)
9.4
0.0094
3T3 fibroblasts
GCGGCGGCGG
(
24
)
3.5
0.0035
E15 cortex
CAAAAAAAAA (
157
)
34.6
0.0346
E15 cortex
GGAAATGCAG (
7
)
19.8
0.0198
E15 cortex
CTGCATTAAG
(
4
)
9.9
0.0099
P1 cortex
CAAAAAAAAA (
157
)
22.7
0.0227
P1 cortex
GGAAATGCAG (
7
)
4.5
0.0045
Hypothalamus
CAAAAAAAAA (
157
)
39.8
0.0398
Hypothalamus
CTGCATTAAG
(
4
)
18.1
0.0181
Hypothalamus
GCGGCGGCGG
(
24
)
7.2
0.0072
Hypothalamus
GGGGTTAAGA (
5
)
3.6
0.0036
Hypothalamus
GGAAATGCAG (
7
)
1.8
0.0018
E12.5 retina
CAAAAAAAAA (
157
)
22.5
0.0225
E12.5 retina
GCGGCGGCGG
(
24
)
15
0.015
E12.5 retina
CTGCATTAAG
(
4
)
7.5
0.0075
E12.5 retina
GGAAATGCAG (
7
)
7.5
0.0075
E12.5 retina
GGGGTTAAGA (
5
)
1.9
0.0019
E14.5 retina
CAAAAAAAAA (
157
)
9.1
0.0091
E14.5 retina
CTGCATTAAG
(
4
)
7.3
0.0073
E14.5 retina
GCGGCGGCGG
(
24
)
5.5
0.0055
E14.5 retina
GCGGCGGGGG (
8
)
1.8
0.0018
E14.5 retina
GGGGTTAAGA (
5
)
1.8
0.0018
E16.5 retina
GCGGCGGCGG
(
24
)
14.5
0.0145
E16.5 retina
CAAAAAAAAA (
157
)
9.1
0.0091
E16.5 retina
GGAAATGCAG (
7
)
7.2
0.0072
E16.5 retina
GCGGCGGGGG (
8
)
1.8
0.0018
E18.5 retina
CAAAAAAAAA (
157
)
41.8
0.0418
E18.5 retina
GCGGCGGCGG
(
24
)
9.1
0.0091
E18.5 retina
GGAAATGCAG (
7
)
5.5
0.0055
E18.5 retina
GGGGTTAAGA (
5
)
5.5
0.0055
E18.5 retina
CTGCATTAAG
(
4
)
3.6
0.0036
E18.5 retina
GCGGCGGGGG (
8
)
1.8
0.0018
P0.5 retina
CAAAAAAAAA (
157
)
137.4
0.1374
P0.5 retina
CTGCATTAAG
(
4
)
7.9
0.0079
P0.5 retina
GCGGCGGCGG
(
24
)
7.9
0.0079
P0.5 retina
GCGGCGGGGG (
8
)
3.9
0.0039
P0.5 retina
GGAAATGCAG (
7
)
3.9
0.0039
P2.5 retina
CAAAAAAAAA (
157
)
52.8
0.0528
P2.5 retina
GCGGCGGCGG
(
24
)
7
0.007
P2.5 retina
GGAAATGCAG (
7
)
7
0.007
P2.5 retina
CTGCATTAAG
(
4
)
5.3
0.0053
P2.5 retina
GGGGTTAAGA (
5
)
1.8
0.0018
P4.5 retina
CAAAAAAAAA (
157
)
41.6
0.0416
P4.5 retina
CTGCATTAAG
(
4
)
13.9
0.0139
P4.5 retina
GGAAATGCAG (
7
)
5.9
0.0059
P4.5 retina
GCGGCGGCGG
(
24
)
4
0.004
P4.5 retina
GGGGTTAAGA (
5
)
4
0.004
P4.5 retina
CTGCATTAAA (
5
)
2
0.002
P6.5 retina
CAAAAAAAAA (
157
)
31.7
0.0317
P6.5 retina
CTGCATTAAG
(
4
)
11.7
0.0117
P6.5 retina
GCGGCGGCGG
(
24
)
5
0.005
P6.5 retina
GGAAATGCAG (
7
)
5
0.005
P10.5 crx- retina
CAAAAAAAAA (
157
)
13
0.013
P10.5 crx- retina
CTGCATTAAG
(
4
)
5.6
0.0056
P10.5 crx- retina
GGAAATGCAG (
7
)
3.7
0.0037
P10.5 crx- retina
GCGGCGGCGG
(
24
)
1.9
0.0019
P10.5 crx+ retina
CAAAAAAAAA (
157
)
32.7
0.0327
P10.5 crx+ retina
GCGGCGGCGG
(
24
)
15.4
0.0154
P10.5 crx+ retina
CTGCATTAAG
(
4
)
11.5
0.0115
P10.5 crx+ retina
GGAAATGCAG (
7
)
11.5
0.0115
Adult retinal
CAAAAAAAAA (
157
)
20.4
0.0204
Adult retinal
GCGGCGGCGG
(
24
)
16.7
0.0167
Adult retinal
GGAAATGCAG (
7
)
7.4
0.0074
Adult retinal
GGGGTTAAGA (
5
)
3.7
0.0037
Adult retinal
CTGCATTAAG
(
4
)
1.9
0.0019
ONL
CAAAAAAAAA (
157
)
17.2
0.0172
ONL
GCGGCGGCGG
(
24
)
9.6
0.0096
ONL
GGAAATGCAG (
7
)
9.6
0.0096
ONL
CTGCATTAAG
(
4
)
7.7
0.0077
