Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.252776	Prkcn	protein kinase C, nu	17		75292
Gene Ontology	ATP binding | kinase activity | protein serine/threonine kinase activity | transferase activity
Human Homolog	PRKCN[protein kinase C, nu]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 48 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGACAATTTT (3) 9.8 0.0098 P8 Cb GC TTTCTAAAAA (7) 4.9 0.0049 P8 Cb GC GTCACACAGA (4) 1.6 0.0016 Cb medulloblastoma TGACAATTTT (3) 2.3 0.0023 Cb medulloblastoma TTTCTAAAAA (7) 2.3 0.0023 P8 GC+1d culture TGACAATTTT (3) 21.7 0.0217 P8 GC+1d culture GAAATTGACA (3) 1.1 0.0011 P8 GC+1d culture TATGATAAAA (4) 1.1 0.0011 P8 GC+1d culture TGGCTGGGAA (4) 1.1 0.0011 P8 GC+1d culture TTTCTAAAAA (7) 1.1 0.0011 P8 GC+SHH+1d culture TGACAATTTT (3) 28.1 0.0281 P8 GC+SHH+1d culture TTTCTAAAAA (7) 5.9 0.0059 P8 GC+SHH+1d culture TGGCTGGGAA (4) 1.2 0.0012 E15 cortex TGACAATTTT (3) 44.5 0.0445 E15 cortex GAAATTGACA (3) 4.9 0.0049 P1 cortex TGACAATTTT (3) 18.2 0.0182 P1 cortex TTTCTAAAAA (7) 4.5 0.0045 Hypothalamus TGACAATTTT (3) 3.6 0.0036 Hypothalamus TGGCTGGGAA (4) 1.8 0.0018 E12.5 retina TGACAATTTT (3) 5.6 0.0056 E12.5 retina TATGATAAAA (4) 3.8 0.0038 E12.5 retina TTTCTAAAAA (7) 3.8 0.0038 E12.5 retina GTCACACAGA (4) 1.9 0.0019 E14.5 retina TGACAATTTT (3) 12.8 0.0128 E14.5 retina TTTCTAAAAA (7) 7.3 0.0073 E16.5 retina TGACAATTTT (3) 19.9 0.0199 E18.5 retina TGACAATTTT (3) 32.7 0.0327 E18.5 retina TATGATAAAA (4) 3.6 0.0036 E18.5 retina TTTCTAAAAA (7) 3.6 0.0036 E18.5 retina GAAATTGACA (3) 1.8 0.0018 P0.5 retina TGACAATTTT (3) 17.7 0.0177 P0.5 retina TGGCTGGGAA (4) 2 0.002 P2.5 retina TGACAATTTT (3) 15.8 0.0158 P2.5 retina TTTCTAAAAA (7) 3.5 0.0035 P4.5 retina TGACAATTTT (3) 19.8 0.0198 P4.5 retina TTTCTAAAAA (7) 7.9 0.0079 P4.5 retina TATGATAAAA (4) 5.9 0.0059 P4.5 retina GTCACACAGA (4) 2 0.002 P6.5 retina TGACAATTTT (3) 6.7 0.0067 P6.5 retina TTTCTAAAAA (7) 1.7 0.0017 P10.5 crx- retina TGACAATTTT (3) 11.1 0.0111 P10.5 crx- retina GAAATTGACA (3) 1.9 0.0019 P10.5 crx+ retina TGACAATTTT (3) 3.8 0.0038 P10.5 crx+ retina GCTGGTGGTC (3) 1.9 0.0019 Adult retinal TGACAATTTT (3) 1.9 0.0019 Adult retinal TTTCTAAAAA (7) 1.9 0.0019 ONL GCTGGTGGTC (3) 3.8 0.0038 ONL GTCACACAGA (4) 1.9 0.0019