Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.253102	Prkar2a	protein kinase, cAMP dependent regulatory, type II alpha	9	9 F2	19087
Gene Ontology	3',5'-cAMP binding | cAMP-dependent protein kinase complex | cAMP-dependent protein kinase regulator activity | kinase activity | membrane | protein amino acid phosphorylation | protein binding | protein serine/threonine kinase activity | receptor activity | signal transduction | transport | transporter activity
Human Homolog	PRKAR2A[protein kinase, cAMP-dependent, regulatory, type II, alpha]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 106 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATGTCATCT (3) 3.3 0.0033 P8 Cb GC ATTTGTCAGC 3.3 0.0033 P8 Cb GC TCTGAAAAAA (10) 3.3 0.0033 P8 Cb GC AAGAGGAACA (4) 1.6 0.0016 P8 Cb GC GAGTTTGTCC (4) 1.6 0.0016 P8 Cb GC GGGGATTTGC (2) 1.6 0.0016 P8 Cb GC GTGTTTGAAA (2) 1.6 0.0016 P8 Cb GC TCTGACTTTC (2) 1.6 0.0016 P8 Cb GC TGCCACCACC (8) 1.6 0.0016 Cb medulloblastoma TCTGAAAAAA (10) 16.2 0.0162 Cb medulloblastoma GTGTTTGAAA (2) 9.2 0.0092 Cb medulloblastoma AAGAGGAACA (4) 2.3 0.0023 Cb medulloblastoma ATTTGTCAGC 2.3 0.0023 Cb medulloblastoma TGCCACCACC (8) 2.3 0.0023 P8 GC+1d culture TCTGAAAAAA (10) 4.6 0.0046 P8 GC+1d culture GTGTTTGAAA (2) 2.3 0.0023 P8 GC+1d culture AAGAGGAACA (4) 1.1 0.0011 P8 GC+SHH+1d culture GTGTTTGAAA (2) 4.7 0.0047 P8 GC+SHH+1d culture TCTGAAAAAA (10) 4.7 0.0047 P8 GC+SHH+1d culture TGCCACCACC (8) 3.5 0.0035 P8 GC+SHH+1d culture AGGTGAGCGA (2) 2.3 0.0023 P8 GC+SHH+1d culture AAGAGGAACA (4) 1.2 0.0012 P8 GC+SHH+1d culture ACTAGTGCTT (80) 1.2 0.0012 P8 GC+SHH+1d culture ATTTGTCAGC 1.2 0.0012 P8 GC+SHH+1d culture TCTGACTTTC (2) 1.2 0.0012 3T3 fibroblasts AAGAGGAACA (4) 7 0.007 E15 cortex GGTCTTTTCT (6) 9.9 0.0099 E15 cortex TGCCACCACC (8) 9.9 0.0099 E15 cortex AATGTCATCT (3) 4.9 0.0049 E15 cortex GGGAGCAGCT (2) 4.9 0.0049 E15 cortex GGGGATTTGC (2) 4.9 0.0049 E15 cortex TCTGAAAAAA (10) 4.9 0.0049 E15 cortex TCTGACTTTC (2) 4.9 0.0049 P1 cortex AAGAGGAACA (4) 4.5 0.0045 P1 cortex GGAGAGGTAC (2) 4.5 0.0045 Hypothalamus TCTGAAAAAA (10) 5.4 0.0054 Hypothalamus AATGTCATCT (3) 3.6 0.0036 Hypothalamus ATTTGTCAGC 3.6 0.0036 Hypothalamus AAGAGGAACA (4) 1.8 0.0018 Hypothalamus GGGAGCAGCT (2) 1.8 0.0018 Hypothalamus GTGTTTGAAA (2) 1.8 0.0018 Hypothalamus TGCCACCACC (8) 1.8 0.0018 E12.5 retina AAGAGGAACA (4) 9.4 0.0094 E12.5 retina GTGTTTGAAA (2) 5.6 0.0056 E12.5 retina TCTGAAAAAA (10) 5.6 0.0056 E12.5 retina ACTAGTGCTT (80) 1.9 0.0019 E12.5 retina GGAGAGGTAC (2) 1.9 0.0019 E12.5 retina GGGGATTTGC (2) 1.9 0.0019 E14.5 retina AAGAGGAACA (4) 5.5 0.0055 E14.5 retina TCTGAAAAAA (10) 3.6 0.0036 E14.5 retina TGCCACCACC (8) 3.6 0.0036 E14.5 retina ATTTGTCAGC 1.8 0.0018 E14.5 retina GAGTTTGTCC (4) 1.8 0.0018 E14.5 retina GTGTTTGAAA (2) 1.8 0.0018 E14.5 retina TCTGACTTTC (2) 1.8 0.0018 E16.5 retina GTGTTTGAAA (2) 5.4 0.0054 E16.5 retina TCTGAAAAAA (10) 5.4 0.0054 E16.5 retina AAGAGGAACA (4) 3.6 0.0036 E16.5 retina GGGAGCAGCT (2) 1.8 0.0018 E18.5 retina GTGTTTGAAA (2) 10.9 0.0109 E18.5 retina TCTGAAAAAA (10) 9.1 0.0091 E18.5 retina AAGAGGAACA (4) 3.6 0.0036 E18.5 retina GGTCTTTTCT (6) 1.8 0.0018 E18.5 retina TGCCACCACC (8) 1.8 0.0018 P0.5 retina AAGAGGAACA (4) 5.9 0.0059 P0.5 retina GTGTTTGAAA (2) 3.9 0.0039 P0.5 retina TGCCACCACC (8) 3.9 0.0039 P0.5 retina GGAGAGGTAC (2) 2 0.002 P2.5 retina GTGTTTGAAA (2) 12.3 0.0123 P2.5 retina TGCCACCACC (8) 5.3 0.0053 P2.5 retina TCTGAAAAAA (10) 3.5 0.0035 P2.5 retina AAGAGGAACA (4) 1.8 0.0018 P2.5 retina GGGGATTTGC (2) 1.8 0.0018 P2.5 retina TCTGACTTTC (2) 1.8 0.0018 P4.5 retina GTGTTTGAAA (2) 25.8 0.0258 P4.5 retina AAGAGGAACA (4) 4 0.004 P4.5 retina TCTGACTTTC (2) 4 0.004 P4.5 retina ACTAGTGCTT (80) 2 0.002 P4.5 retina GGGGATTTGC (2) 2 0.002 P6.5 retina GTGTTTGAAA (2) 8.3 0.0083 P6.5 retina GGAGAGGTAC (2) 3.3 0.0033 P6.5 retina GAGTTTGTCC (4) 1.7 0.0017 P6.5 retina GGTCTTTTCT (6) 1.7 0.0017 P6.5 retina TCTGACTTTC (2) 1.7 0.0017 P10.5 crx- retina GTGTTTGAAA (2) 24.2 0.0242 P10.5 crx- retina TCTGAAAAAA (10) 5.6 0.0056 P10.5 crx- retina TGCCACCACC (8) 3.7 0.0037 P10.5 crx- retina AATGTCATCT (3) 1.9 0.0019 P10.5 crx- retina AGGTGAGCGA (2) 1.9 0.0019 P10.5 crx- retina ATTTGTCAGC 1.9 0.0019 P10.5 crx- retina GAGTTTGTCC (4) 1.9 0.0019 P10.5 crx- retina GGGAGCAGCT (2) 1.9 0.0019 P10.5 crx+ retina GTGTTTGAAA (2) 5.8 0.0058 P10.5 crx+ retina TGCCACCACC (8) 5.8 0.0058 P10.5 crx+ retina AAGAGGAACA (4) 1.9 0.0019 P10.5 crx+ retina AGGTGAGCGA (2) 1.9 0.0019 P10.5 crx+ retina TCTGAAAAAA (10) 1.9 0.0019 Adult retinal TGCCACCACC (8) 7.4 0.0074 Adult retinal GTGTTTGAAA (2) 5.6 0.0056 Adult retinal AAGAGGAACA (4) 1.9 0.0019 Adult retinal AATGTCATCT (3) 1.9 0.0019 Adult retinal ATTTGTCAGC 1.9 0.0019 Adult retinal TCTGAAAAAA (10) 1.9 0.0019 ONL TGCCACCACC (8) 9.6 0.0096 ONL TCTGACTTTC (2) 3.8 0.0038 ONL GGTCTTTTCT (6) 1.9 0.0019