Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.25340
6720467C03Rik
RIKEN cDNA 6720467C03 gene
4
68099
Human Homolog
LOC137392[similar to CG6405 gene product]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 40 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAAAAGCCTT
(
6
)
4.9
0.0049
P8 Cb GC
TACATAAAAT (
14
)
1.6
0.0016
Cb medulloblastoma
GTAAAGATGA (
5
)
2.3
0.0023
P8 GC+1d culture
TACATAAAAT (
14
)
2.3
0.0023
P8 GC+1d culture
GAAAAGCCTT
(
6
)
1.1
0.0011
P8 GC+SHH+1d culture
TACATAAAAT (
14
)
3.5
0.0035
P8 GC+SHH+1d culture
GTAAAGATGA (
5
)
1.2
0.0012
3T3 fibroblasts
GAAAAGCCTT
(
6
)
7
0.007
3T3 fibroblasts
TACATAAAAT (
14
)
3.5
0.0035
E15 cortex
TACATAAAAT (
14
)
4.9
0.0049
P1 cortex
GAAAAGCCTT
(
6
)
9.1
0.0091
P1 cortex
GTAAAGATGA (
5
)
4.5
0.0045
Hypothalamus
TAAATGTATT (
2
)
5.4
0.0054
Hypothalamus
GAAAAGCCTT
(
6
)
1.8
0.0018
Hypothalamus
TACATAAAAT (
14
)
1.8
0.0018
E12.5 retina
TACATAAAAT (
14
)
3.8
0.0038
E12.5 retina
GAAAAGCCTT
(
6
)
1.9
0.0019
E14.5 retina
TACATAAAAT (
14
)
7.3
0.0073
E14.5 retina
GAAAAGCCTT
(
6
)
1.8
0.0018
E16.5 retina
TACATAAAAT (
14
)
3.6
0.0036
E16.5 retina
GAAAAGCCTT
(
6
)
1.8
0.0018
E16.5 retina
TAAATGTATT (
2
)
1.8
0.0018
E18.5 retina
TACATAAAAT (
14
)
12.7
0.0127
E18.5 retina
GAAAAGCCTT
(
6
)
1.8
0.0018
P0.5 retina
GAAAAGCCTT
(
6
)
2
0.002
P0.5 retina
TAAATGTATT (
2
)
2
0.002
P2.5 retina
TACATAAAAT (
14
)
3.5
0.0035
P2.5 retina
GAAAAGCCTT
(
6
)
1.8
0.0018
P2.5 retina
TAAATGTATT (
2
)
1.8
0.0018
P4.5 retina
TACATAAAAT (
14
)
7.9
0.0079
P6.5 retina
TAAATGTATT (
2
)
8.3
0.0083
P6.5 retina
TACATAAAAT (
14
)
1.7
0.0017
P10.5 crx- retina
GAAAAGCCTT
(
6
)
7.4
0.0074
P10.5 crx- retina
TACATAAAAT (
14
)
3.7
0.0037
P10.5 crx- retina
TAAATGTATT (
2
)
1.9
0.0019
P10.5 crx+ retina
TACATAAAAT (
14
)
5.8
0.0058
P10.5 crx+ retina
TAAATGTATT (
2
)
1.9
0.0019
Adult retinal
GAAAAGCCTT
(
6
)
1.9
0.0019
ONL
TAAATGTATT (
2
)
3.8
0.0038
ONL
TACATAAAAT (
14
)
1.9
0.0019
