Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.253403
1810073N04Rik
RIKEN cDNA 1810073N04 gene
11
72055
Human Homolog
MGC15523[hypothetical protein MGC15523]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 132 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCCCTGGTGC (
4
)
9.8
0.0098
P8 Cb GC
CCTTTCTGCT (
4
)
8.2
0.0082
P8 Cb GC
AAGAGAAAGA (
17
)
4.9
0.0049
P8 Cb GC
GTGGGGTTTT (
4
)
4.9
0.0049
P8 Cb GC
TCTGTCTGCC
(
4
)
4.9
0.0049
P8 Cb GC
ATCCCCAATG (
4
)
1.6
0.0016
P8 Cb GC
CTGTCAGGAC
(
3
)
1.6
0.0016
P8 Cb GC
GCAGAAGGAG (
4
)
1.6
0.0016
Cb medulloblastoma
GCCCTGGTGC (
4
)
53.2
0.0532
Cb medulloblastoma
GTGGGGTTTT (
4
)
16.2
0.0162
Cb medulloblastoma
AAGAGAAAGA (
17
)
4.6
0.0046
Cb medulloblastoma
CCTTTCTGCT (
4
)
2.3
0.0023
Cb medulloblastoma
TCTGTCTGCC
(
4
)
2.3
0.0023
P8 GC+1d culture
GCCCTGGTGC (
4
)
46.8
0.0468
P8 GC+1d culture
GTGGGGTTTT (
4
)
11.4
0.0114
P8 GC+1d culture
AAGAGAAAGA (
17
)
9.1
0.0091
P8 GC+1d culture
TCTGTCTGCC
(
4
)
9.1
0.0091
P8 GC+1d culture
CCTTTCTGCT (
4
)
4.6
0.0046
P8 GC+1d culture
CCCTAGTTAG
1.1
0.0011
P8 GC+1d culture
CTGTCAGGAC
(
3
)
1.1
0.0011
P8 GC+1d culture
TGCCATCACA
1.1
0.0011
P8 GC+SHH+1d culture
GCCCTGGTGC (
4
)
45.7
0.0457
P8 GC+SHH+1d culture
TCTGTCTGCC
(
4
)
11.7
0.0117
P8 GC+SHH+1d culture
AAGAGAAAGA (
17
)
7
0.007
P8 GC+SHH+1d culture
CCTTTCTGCT (
4
)
5.9
0.0059
P8 GC+SHH+1d culture
GTGGGGTTTT (
4
)
4.7
0.0047
P8 GC+SHH+1d culture
ATCCCCAATG (
4
)
1.2
0.0012
P8 GC+SHH+1d culture
CTGTCAGGAC
(
3
)
1.2
0.0012
3T3 fibroblasts
GCCCTGGTGC (
4
)
3.5
0.0035
3T3 fibroblasts
GTGGGGTTTT (
4
)
3.5
0.0035
E15 cortex
GTGGGGTTTT (
4
)
24.7
0.0247
E15 cortex
GCCCTGGTGC (
4
)
19.8
0.0198
E15 cortex
GCAGAAGGAG (
4
)
9.9
0.0099
E15 cortex
TCTGTCTGCC
(
4
)
9.9
0.0099
P1 cortex
AGAAGCAGGT (
6
)
9.1
0.0091
P1 cortex
AAGAGAAAGA (
17
)
4.5
0.0045
P1 cortex
ATCCCCAATG (
4
)
4.5
0.0045
P1 cortex
GTGGGGTTTT (
4
)
4.5
0.0045
Hypothalamus
GCCCTGGTGC (
4
)
19.9
0.0199
Hypothalamus
AAGAGAAAGA (
17
)
14.5
0.0145
Hypothalamus
TCTGTCTGCC
(
4
)
3.6
0.0036
Hypothalamus
TGCCATCACA
3.6
0.0036
Hypothalamus
ATCCCCAATG (
4
)
1.8
0.0018
Hypothalamus
CCTTTCTGCT (
4
)
1.8
0.0018
Hypothalamus
GCAGAAGGAG (
4
)
1.8
0.0018
E12.5 retina
GCCCTGGTGC (
4
)
13.1
0.0131
E12.5 retina
GTGGGGTTTT (
4
)
13.1
0.0131
E12.5 retina
AAGAGAAAGA (
17
)
7.5
0.0075
E12.5 retina
TCTGTCTGCC
(
4
)
5.6
0.0056
E12.5 retina
ATCCCCAATG (
4
)
3.8
0.0038
E12.5 retina
CCTTTCTGCT (
4
)
3.8
0.0038
E12.5 retina
GCAGAAGGAG (
4
)
1.9
0.0019
E14.5 retina
AAGAGAAAGA (
17
)
14.6
0.0146
E14.5 retina
GCCCTGGTGC (
4
)
12.8
0.0128
E14.5 retina
GTGGGGTTTT (
4
)
10.9
0.0109
E14.5 retina
ATCCCCAATG (
4
)
5.5
0.0055
E14.5 retina
CCTTTCTGCT (
4
)
5.5
0.0055
E14.5 retina
CCCTAGTTAG
1.8
0.0018
E14.5 retina
GGGGGGTTTT (
8
)
1.8
0.0018
E16.5 retina
GCCCTGGTGC (
4
)
18.1
0.0181
E16.5 retina
GTGGGGTTTT (
4
)
16.3
0.0163
E16.5 retina
ATCCCCAATG (
4
)
9.1
0.0091
E16.5 retina
CCTTTCTGCT (
4
)
7.2
0.0072
E16.5 retina
AAGAGAAAGA (
17
)
1.8
0.0018
E16.5 retina
GCAGAAGGAG (
4
)
1.8
0.0018
E18.5 retina
GCCCTGGTGC (
4
)
21.8
0.0218
E18.5 retina
AAGAGAAAGA (
17
)
16.4
0.0164
E18.5 retina
GTGGGGTTTT (
4
)
12.7
0.0127
E18.5 retina
ATCCCCAATG (
4
)
3.6
0.0036
E18.5 retina
GGATGGGGAA (
4
)
3.6
0.0036
E18.5 retina
TCTGTCTGCC
(
4
)
3.6
0.0036
E18.5 retina
CCTTTCTGCT (
4
)
1.8
0.0018
E18.5 retina
GCAGAAGGAG (
4
)
1.8
0.0018
E18.5 retina
TGCCATCACA
1.8
0.0018
P0.5 retina
GCCCTGGTGC (
4
)
37.3
0.0373
P0.5 retina
GTGGGGTTTT (
4
)
11.8
0.0118
P0.5 retina
CCTTTCTGCT (
4
)
7.9
0.0079
P0.5 retina
TCTGTCTGCC
(
4
)
5.9
0.0059
P0.5 retina
AGAAGCAGGT (
6
)
2
0.002
P0.5 retina
ATCCCCAATG (
4
)
2
0.002
P0.5 retina
GGGGGGTTTT (
8
)
2
0.002
P2.5 retina
GCCCTGGTGC (
4
)
37
0.037
P2.5 retina
GTGGGGTTTT (
4
)
15.8
0.0158
P2.5 retina
AAGAGAAAGA (
17
)
8.8
0.0088
P2.5 retina
TCTGTCTGCC
(
4
)
7
0.007
P2.5 retina
ATCCCCAATG (
4
)
3.5
0.0035
P2.5 retina
CCTTTCTGCT (
4
)
3.5
0.0035
P2.5 retina
CCCTAGTTAG
1.8
0.0018
P2.5 retina
GGATGGGGAA (
4
)
1.8
0.0018
P2.5 retina
GGGGGGTTTT (
8
)
1.8
0.0018
P2.5 retina
TGCCATCACA
1.8
0.0018
P4.5 retina
GCCCTGGTGC (
4
)
49.5
0.0495
P4.5 retina
GTGGGGTTTT (
4
)
19.8
0.0198
P4.5 retina
AAGAGAAAGA (
17
)
5.9
0.0059
P4.5 retina
CCTTTCTGCT (
4
)
4
0.004
P4.5 retina
ATCCCCAATG (
4
)
2
0.002
P4.5 retina
TGCCATCACA
2
0.002
P6.5 retina
GCCCTGGTGC (
4
)
50
0.05
P6.5 retina
GTGGGGTTTT (
4
)
11.7
0.0117
P6.5 retina
AAGAGAAAGA (
17
)
5
0.005
P6.5 retina
TCTGTCTGCC
(
4
)
5
0.005
P6.5 retina
ATCCCCAATG (
4
)
3.3
0.0033
P6.5 retina
CCTTTCTGCT (
4
)
3.3
0.0033
P6.5 retina
GGGGGGTTTT (
8
)
1.7
0.0017
P6.5 retina
TGCCATCACA
1.7
0.0017
P10.5 crx- retina
GCCCTGGTGC (
4
)
42.7
0.0427
P10.5 crx- retina
GTGGGGTTTT (
4
)
11.1
0.0111
P10.5 crx- retina
AAGAGAAAGA (
17
)
9.3
0.0093
P10.5 crx- retina
CCTTTCTGCT (
4
)
5.6
0.0056
P10.5 crx- retina
TCTGTCTGCC
(
4
)
3.7
0.0037
P10.5 crx- retina
CCCTAGTTAG
1.9
0.0019
P10.5 crx- retina
CTGTCAGGAC
(
3
)
1.9
0.0019
P10.5 crx+ retina
GCCCTGGTGC (
4
)
34.6
0.0346
P10.5 crx+ retina
AAGAGAAAGA (
17
)
13.5
0.0135
P10.5 crx+ retina
GTGGGGTTTT (
4
)
13.5
0.0135
P10.5 crx+ retina
CCTTTCTGCT (
4
)
9.6
0.0096
P10.5 crx+ retina
TCTGTCTGCC
(
4
)
3.8
0.0038
P10.5 crx+ retina
GCAGAAGGAG (
4
)
1.9
0.0019
P10.5 crx+ retina
TGCCATCACA
1.9
0.0019
Adult retinal
GCCCTGGTGC (
4
)
16.7
0.0167
Adult retinal
GTGGGGTTTT (
4
)
13
0.013
Adult retinal
AAGAGAAAGA (
17
)
5.6
0.0056
Adult retinal
TCTGTCTGCC
(
4
)
3.7
0.0037
Adult retinal
CCTTTCTGCT (
4
)
1.9
0.0019
Adult retinal
CTGTCAGGAC
(
3
)
1.9
0.0019
Adult retinal
GCAGAAGGAG (
4
)
1.9
0.0019
ONL
GCCCTGGTGC (
4
)
28.7
0.0287
ONL
AAGAGAAAGA (
17
)
13.4
0.0134
ONL
GTGGGGTTTT (
4
)
5.7
0.0057
ONL
CCTTTCTGCT (
4
)
3.8
0.0038
ONL
GCAGAAGGAG (
4
)
1.9
0.0019
ONL
TCTGTCTGCC
(
4
)
1.9
0.0019
