Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.253424	Il1rap	interleukin 1 receptor accessory protein	16		16180
Gene Ontology	cytokine and chemokine mediated signaling pathway | integral to membrane | interleukin-1 receptor activity | interleukin-2 biosynthesis | membrane | receptor activity | signal transducer activity | transmembrane receptor activity
Human Homolog	IL1RAP[interleukin 1 receptor accessory protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 38 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  Cb medulloblastoma AAGTGTGAAA (4) 16.2 0.0162 P8 GC+1d culture TGTGTGTGTA (16) 4.6 0.0046 P8 GC+1d culture AAGTGTGAAA (4) 3.4 0.0034 P8 GC+1d culture CTGCTTTGTT (4) 3.4 0.0034 P8 GC+SHH+1d culture CTGCTTTGTT (4) 2.3 0.0023 P8 GC+SHH+1d culture AAGTGTGAAA (4) 1.2 0.0012 P8 GC+SHH+1d culture GGATTTAATT (5) 1.2 0.0012 3T3 fibroblasts CTGCTTTGTT (4) 3.5 0.0035 E15 cortex TGTGTGTGTA (16) 4.9 0.0049 Hypothalamus AAGTGTGAAA (4) 10.9 0.0109 Hypothalamus CTGCTTTGTT (4) 1.8 0.0018 Hypothalamus TGTGTGTGTA (16) 1.8 0.0018 E12.5 retina AAGTGTGAAA (4) 1.9 0.0019 E14.5 retina AAGTGTGAAA (4) 1.8 0.0018 E16.5 retina AAGTGTGAAA (4) 3.6 0.0036 E16.5 retina CTGCTTTGTT (4) 1.8 0.0018 E16.5 retina GGATTTAATT (5) 1.8 0.0018 E16.5 retina TGTGTGTGTA (16) 1.8 0.0018 E18.5 retina AAGTGTGAAA (4) 5.5 0.0055 E18.5 retina CTGCTTTGTT (4) 1.8 0.0018 E18.5 retina GCTTTTGTTT (4) 1.8 0.0018 P0.5 retina TGTGTGTGTA (16) 7.9 0.0079 P0.5 retina AAGTGTGAAA (4) 2 0.002 P2.5 retina AAGTGTGAAA (4) 5.3 0.0053 P2.5 retina GCTTTTGTTT (4) 1.8 0.0018 P4.5 retina AAGTGTGAAA (4) 4 0.004 P4.5 retina TGTGTGTGTA (16) 2 0.002 P6.5 retina AAGTGTGAAA (4) 6.7 0.0067 P6.5 retina TGTGTGTGTA (16) 5 0.005 P10.5 crx- retina AAGTGTGAAA (4) 13 0.013 P10.5 crx- retina TGTGTGTGTA (16) 5.6 0.0056 P10.5 crx+ retina AAGTGTGAAA (4) 5.8 0.0058 Adult retinal TGTGTGTGTA (16) 7.4 0.0074 Adult retinal AAGTGTGAAA (4) 3.7 0.0037 Adult retinal GGATTTAATT (5) 1.9 0.0019 ONL TGTGTGTGTA (16) 3.8 0.0038 ONL AAGTGTGAAA (4) 1.9 0.0019 ONL GCTTTTGTTT (4) 1.9 0.0019