Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.253559
Plekha6
pleckstrin homology domain containing, family A member 6
1
240753
Mm.253559
9530028L01Rik
RIKEN cDNA 9530028L01 gene
1
68124
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 30 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAATCCCCAA (
6
)
1.6
0.0016
P8 Cb GC
CCCCGTACAT
(
2
)
1.6
0.0016
P8 Cb GC
GTCGGGACAG
(
2
)
1.6
0.0016
P8 GC+1d culture
TTCTTGGGGC
(
4
)
4.6
0.0046
P8 GC+1d culture
AAATCCCCAA (
6
)
2.3
0.0023
P8 GC+SHH+1d culture
CCCCGTACAT
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
GTCGGGACAG
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
TTCTTGGGGC
(
4
)
1.2
0.0012
3T3 fibroblasts
CCCCGTACAT
(
2
)
56.1
0.0561
3T3 fibroblasts
AAATCCCCAA (
6
)
3.5
0.0035
E15 cortex
AAATCCCCAA (
6
)
4.9
0.0049
P1 cortex
CCCCGTACAT
(
2
)
18.2
0.0182
Hypothalamus
GTCGGGACAG
(
2
)
1.8
0.0018
Hypothalamus
TTCTTGGGGC
(
4
)
1.8
0.0018
E12.5 retina
AAATCCCCAA (
6
)
3.8
0.0038
E12.5 retina
CTGTCTGTGC
(
8
)
3.8
0.0038
E12.5 retina
GTCGGGACAG
(
2
)
1.9
0.0019
E16.5 retina
AAATCCCCAA (
6
)
3.6
0.0036
E16.5 retina
CTGTCTGTGC
(
8
)
1.8
0.0018
E16.5 retina
TGGAATACCA
(
4
)
1.8
0.0018
E18.5 retina
TTCTTGGGGC
(
4
)
1.8
0.0018
P0.5 retina
CCCCGTACAT
(
2
)
2
0.002
P0.5 retina
TGGAATACCA
(
4
)
2
0.002
P2.5 retina
CCCCGTACAT
(
2
)
1.8
0.0018
P6.5 retina
TTCTTGGGGC
(
4
)
1.7
0.0017
P10.5 crx- retina
TTCTTGGGGC
(
4
)
1.9
0.0019
Adult retinal
CCCCGTACAT
(
2
)
7.4
0.0074
ONL
CCCCGTACAT
(
2
)
5.7
0.0057
ONL
TTCTTGGGGC
(
4
)
3.8
0.0038
ONL
TGGAATACCA
(
4
)
1.9
0.0019
