Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.253564	Actn1	actinin, alpha 1	12	12 35.0 cM	109711
Mm.253564	Strm	striamin	12		20904
Gene Ontology	negative regulation of transcription | nucleus | protein binding | transcription corepressor activity
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 57 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGCAGAAGC (9) 4.9 0.0049 P8 Cb GC GCTGCCTTCA (8) 1.6 0.0016 P8 Cb GC TCATTCTCCA (4) 1.6 0.0016 Cb medulloblastoma GCTTCTCATT (5) 2.3 0.0023 Cb medulloblastoma TCATTCTCCA (4) 2.3 0.0023 P8 GC+1d culture TCATTCTCCA (4) 5.7 0.0057 P8 GC+1d culture AGAATATTTT (6) 1.1 0.0011 P8 GC+1d culture GCTGCCTTCA (8) 1.1 0.0011 P8 GC+1d culture GCTTCTCATT (5) 1.1 0.0011 P8 GC+1d culture TCCTTCTCCA (4) 1.1 0.0011 P8 GC+SHH+1d culture CAGCAGAAGC (9) 4.7 0.0047 P8 GC+SHH+1d culture TCCTTCTCCA (4) 2.3 0.0023 P8 GC+SHH+1d culture AGAATATTTT (6) 1.2 0.0012 P8 GC+SHH+1d culture GCTGCCTTCA (8) 1.2 0.0012 3T3 fibroblasts GCTTCTCATT (5) 7 0.007 3T3 fibroblasts GCTGCCTTCA (8) 3.5 0.0035 3T3 fibroblasts TCCTTCTCCA (4) 3.5 0.0035 E15 cortex CAGCAGAAGC (9) 4.9 0.0049 P1 cortex GCTGCCTTCA (8) 4.5 0.0045 P1 cortex TCCTTCTCCA (4) 4.5 0.0045 Hypothalamus CAGCAGAAGC (9) 7.2 0.0072 Hypothalamus GCTGCCTTCA (8) 1.8 0.0018 Hypothalamus GCTTCTCATT (5) 1.8 0.0018 Hypothalamus TCCTTCTCCA (4) 1.8 0.0018 E12.5 retina TCATTCTCCA (4) 7.5 0.0075 E12.5 retina TCCTTCTCCA (4) 1.9 0.0019 E14.5 retina TCATTCTCCA (4) 9.1 0.0091 E14.5 retina GCTTCTCATT (5) 3.6 0.0036 E14.5 retina CAGCAGAAGC (9) 1.8 0.0018 E16.5 retina CAGCAGAAGC (9) 3.6 0.0036 E16.5 retina GCTTCTCATT (5) 1.8 0.0018 E18.5 retina CAGCAGAAGC (9) 3.6 0.0036 E18.5 retina AGCAGTTCAA (3) 1.8 0.0018 E18.5 retina TCATTCTCCA (4) 1.8 0.0018 P0.5 retina TCATTCTCCA (4) 5.9 0.0059 P0.5 retina CAGCAGAAGC (9) 3.9 0.0039 P0.5 retina GGCAAGAGCC (2) 3.9 0.0039 P0.5 retina AGAATATTTT (6) 2 0.002 P0.5 retina GCTGCCTTCA (8) 2 0.002 P2.5 retina TCATTCTCCA (4) 3.5 0.0035 P2.5 retina AGAATATTTT (6) 1.8 0.0018 P2.5 retina CAGCAGAAGC (9) 1.8 0.0018 P2.5 retina GCTGCCTTCA (8) 1.8 0.0018 P4.5 retina TCATTCTCCA (4) 7.9 0.0079 P4.5 retina GCTGCCTTCA (8) 2 0.002 P6.5 retina TCATTCTCCA (4) 10 0.01 P6.5 retina TCCTTCTCCA (4) 1.7 0.0017 P10.5 crx- retina TCATTCTCCA (4) 9.3 0.0093 P10.5 crx+ retina TCATTCTCCA (4) 11.5 0.0115 P10.5 crx+ retina AGCAGTTCAA (3) 1.9 0.0019 P10.5 crx+ retina TCCTTCTCCA (4) 1.9 0.0019 Adult retinal TCATTCTCCA (4) 9.3 0.0093 Adult retinal TCCTTCTCCA (4) 5.6 0.0056 Adult retinal GCTGCCTTCA (8) 1.9 0.0019 Adult retinal GGCAAGAGCC (2) 1.9 0.0019 ONL TCATTCTCCA (4) 11.5 0.0115 ONL GCTGCCTTCA (8) 1.9 0.0019