Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.254017	Notch2	Notch gene homolog 2 (Drosophila)	3	3 45.6 cM	18129
Gene Ontology	calcium ion binding | cell differentiation | determination of left/right symmetry | development | DNA binding | extracellular space | integral to membrane | membrane | morphogenesis of an epithelial sheet | receptor activity | regulation of development | regulation of transcription, DNA-dependent | transcription factor activity
Human Homolog	NOTCH2[Notch homolog 2 (Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 69 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCAAAAAAAA (60) 17.9 0.0179 P8 Cb GC TTCAAAAAAA (25) 13.1 0.0131 P8 Cb GC CGGATCTGCT (3) 3.3 0.0033 P8 Cb GC GAACCTTTTT (2) 1.6 0.0016 P8 Cb GC TCAAAGCTCA 1.6 0.0016 Cb medulloblastoma TCAAAAAAAA (60) 99.4 0.0994 Cb medulloblastoma TTCAAAAAAA (25) 37 0.037 P8 GC+1d culture TCAAAAAAAA (60) 17.1 0.0171 P8 GC+1d culture TTCAAAAAAA (25) 12.6 0.0126 P8 GC+1d culture CCCACGAGCC (2) 1.1 0.0011 P8 GC+1d culture CTTTCCCATA (2) 1.1 0.0011 P8 GC+SHH+1d culture TCAAAAAAAA (60) 51.5 0.0515 P8 GC+SHH+1d culture TTCAAAAAAA (25) 29.3 0.0293 P8 GC+SHH+1d culture CGGATCTGCT (3) 1.2 0.0012 P8 GC+SHH+1d culture GAACCTTTTT (2) 1.2 0.0012 P8 GC+SHH+1d culture TCAAAGCTCA 1.2 0.0012 3T3 fibroblasts TCAAAAAAAA (60) 7 0.007 3T3 fibroblasts CTTTCCCATA (2) 3.5 0.0035 3T3 fibroblasts TCAAAGCTCA 3.5 0.0035 E15 cortex TTCAAAAAAA (25) 29.7 0.0297 E15 cortex TCAAAAAAAA (60) 14.8 0.0148 P1 cortex TCAAAAAAAA (60) 22.7 0.0227 P1 cortex GAACCTTTTT (2) 9.1 0.0091 P1 cortex CTTTCCCATA (2) 4.5 0.0045 P1 cortex TTCAAAAAAA (25) 4.5 0.0045 Hypothalamus TCAAAAAAAA (60) 39.8 0.0398 Hypothalamus TTCAAAAAAA (25) 7.2 0.0072 Hypothalamus CGGATCTGCT (3) 1.8 0.0018 Hypothalamus TCAAAGCTCA 1.8 0.0018 E12.5 retina TCAAAAAAAA (60) 18.8 0.0188 E12.5 retina TTCAAAAAAA (25) 9.4 0.0094 E12.5 retina CTTTCCCATA (2) 1.9 0.0019 E12.5 retina GAACCTTTTT (2) 1.9 0.0019 E14.5 retina TCAAAAAAAA (60) 41.9 0.0419 E14.5 retina TTCAAAAAAA (25) 20 0.02 E14.5 retina CCCACGAGCC (2) 1.8 0.0018 E14.5 retina CGGATCTGCT (3) 1.8 0.0018 E14.5 retina TCAAAGCTCA 1.8 0.0018 E16.5 retina TCAAAAAAAA (60) 18.1 0.0181 E16.5 retina TTCAAAAAAA (25) 9.1 0.0091 E18.5 retina TCAAAAAAAA (60) 49.1 0.0491 E18.5 retina TTCAAAAAAA (25) 36.4 0.0364 P0.5 retina TCAAAAAAAA (60) 31.4 0.0314 P0.5 retina TTCAAAAAAA (25) 9.8 0.0098 P0.5 retina CGGATCTGCT (3) 3.9 0.0039 P0.5 retina GAACCTTTTT (2) 2 0.002 P2.5 retina TCAAAAAAAA (60) 35.2 0.0352 P2.5 retina TTCAAAAAAA (25) 7 0.007 P2.5 retina CTTTCCCATA (2) 3.5 0.0035 P2.5 retina CCCACGAGCC (2) 1.8 0.0018 P2.5 retina CGGATCTGCT (3) 1.8 0.0018 P4.5 retina TCAAAAAAAA (60) 37.6 0.0376 P4.5 retina TTCAAAAAAA (25) 31.7 0.0317 P4.5 retina CGGATCTGCT (3) 2 0.002 P6.5 retina TCAAAAAAAA (60) 31.7 0.0317 P6.5 retina TTCAAAAAAA (25) 8.3 0.0083 P6.5 retina TCAAAGCTCA 3.3 0.0033 P10.5 crx- retina TCAAAAAAAA (60) 14.9 0.0149 P10.5 crx- retina TTCAAAAAAA (25) 5.6 0.0056 P10.5 crx- retina CCCACGAGCC (2) 1.9 0.0019 P10.5 crx- retina TCAAAGCTCA 1.9 0.0019 P10.5 crx+ retina TCAAAAAAAA (60) 17.3 0.0173 P10.5 crx+ retina TTCAAAAAAA (25) 9.6 0.0096 Adult retinal TCAAAAAAAA (60) 20.4 0.0204 Adult retinal TTCAAAAAAA (25) 5.6 0.0056 Adult retinal CCCACGAGCC (2) 1.9 0.0019 ONL TCAAAAAAAA (60) 15.3 0.0153 ONL TTCAAAAAAA (25) 3.8 0.0038 ONL CTTTCCCATA (2) 1.9 0.0019