Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.254114
D10Ertd214e
DNA segment, Chr 10, ERATO Doi 214, expressed
10
10 38.0 cM
52637
Mm.254114
4932439E07Rik
RIKEN cDNA 4932439E07 gene
10
103405
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 66 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TAAAAAAAAA (
196
)
47.3
0.0473
P8 Cb GC
TGGTGCACGT
(
2
)
9.8
0.0098
Cb medulloblastoma
TAAAAAAAAA (
196
)
106.4
0.1064
Cb medulloblastoma
TGGTGCACGT
(
2
)
13.9
0.0139
Cb medulloblastoma
GATACACTTT
(
2
)
6.9
0.0069
Cb medulloblastoma
TACATTGTAA (
2
)
4.6
0.0046
Cb medulloblastoma
TGGTGCACCT
(
5
)
2.3
0.0023
P8 GC+1d culture
TAAAAAAAAA (
196
)
66.2
0.0662
P8 GC+1d culture
TGGTGCACGT
(
2
)
8
0.008
P8 GC+SHH+1d culture
TAAAAAAAAA (
196
)
93.7
0.0937
P8 GC+SHH+1d culture
TGGTGCACGT
(
2
)
8.2
0.0082
P8 GC+SHH+1d culture
TACATTGTAA (
2
)
3.5
0.0035
P8 GC+SHH+1d culture
GATACACTTT
(
2
)
1.2
0.0012
3T3 fibroblasts
TAAAAAAAAA (
196
)
7
0.007
E15 cortex
TAAAAAAAAA (
196
)
9.9
0.0099
P1 cortex
TAAAAAAAAA (
196
)
50
0.05
P1 cortex
TGGTGCACGT
(
2
)
4.5
0.0045
Hypothalamus
TAAAAAAAAA (
196
)
32.6
0.0326
Hypothalamus
TACATTGTAA (
2
)
14.5
0.0145
Hypothalamus
TGGTGCACGT
(
2
)
9.1
0.0091
Hypothalamus
GATACACTTT
(
2
)
1.8
0.0018
E12.5 retina
TAAAAAAAAA (
196
)
24.4
0.0244
E12.5 retina
TGGTGCACGT
(
2
)
7.5
0.0075
E12.5 retina
GATACACTTT
(
2
)
5.6
0.0056
E12.5 retina
TACATTGTAA (
2
)
1.9
0.0019
E14.5 retina
TAAAAAAAAA (
196
)
41.9
0.0419
E14.5 retina
ATTTTGGAAT (
8
)
1.8
0.0018
E14.5 retina
TGGTGCACGT
(
2
)
1.8
0.0018
E16.5 retina
TAAAAAAAAA (
196
)
23.5
0.0235
E16.5 retina
TGGTGCACGT
(
2
)
7.2
0.0072
E16.5 retina
GATACACTTT
(
2
)
3.6
0.0036
E16.5 retina
ATTTTGGAAT (
8
)
1.8
0.0018
E16.5 retina
TACATTGTAA (
2
)
1.8
0.0018
E18.5 retina
TAAAAAAAAA (
196
)
107.3
0.1073
E18.5 retina
GATACACTTT
(
2
)
3.6
0.0036
E18.5 retina
TGGTGCACGT
(
2
)
3.6
0.0036
E18.5 retina
TACATTGTAA (
2
)
1.8
0.0018
P0.5 retina
TAAAAAAAAA (
196
)
37.3
0.0373
P0.5 retina
TGGTGCACGT
(
2
)
5.9
0.0059
P0.5 retina
GATACACTTT
(
2
)
2
0.002
P2.5 retina
TAAAAAAAAA (
196
)
72.2
0.0722
P2.5 retina
TGGTGCACGT
(
2
)
8.8
0.0088
P2.5 retina
GATACACTTT
(
2
)
1.8
0.0018
P4.5 retina
TAAAAAAAAA (
196
)
122.8
0.1228
P4.5 retina
TGGTGCACGT
(
2
)
5.9
0.0059
P4.5 retina
TACATTGTAA (
2
)
4
0.004
P4.5 retina
GATACACTTT
(
2
)
2
0.002
P6.5 retina
TAAAAAAAAA (
196
)
63.4
0.0634
P6.5 retina
TGGTGCACGT
(
2
)
5
0.005
P6.5 retina
TACATTGTAA (
2
)
1.7
0.0017
P10.5 crx- retina
TGGTGCACGT
(
2
)
14.9
0.0149
P10.5 crx- retina
TAAAAAAAAA (
196
)
9.3
0.0093
P10.5 crx- retina
ATTTTGGAAT (
8
)
5.6
0.0056
P10.5 crx- retina
TACATTGTAA (
2
)
5.6
0.0056
P10.5 crx- retina
TGGTGCACCT
(
5
)
1.9
0.0019
P10.5 crx+ retina
TAAAAAAAAA (
196
)
25
0.025
P10.5 crx+ retina
TGGTGCACGT
(
2
)
11.5
0.0115
P10.5 crx+ retina
GATACACTTT
(
2
)
3.8
0.0038
P10.5 crx+ retina
ATTTTGGAAT (
8
)
1.9
0.0019
P10.5 crx+ retina
TACATTGTAA (
2
)
1.9
0.0019
Adult retinal
TAAAAAAAAA (
196
)
18.5
0.0185
Adult retinal
TGGTGCACGT
(
2
)
5.6
0.0056
Adult retinal
GATACACTTT
(
2
)
3.7
0.0037
Adult retinal
TACATTGTAA (
2
)
3.7
0.0037
ONL
TAAAAAAAAA (
196
)
28.7
0.0287
ONL
TGGTGCACGT
(
2
)
7.7
0.0077
