Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.254297	Atp7a	ATPase, Cu++ transporting, alpha polypeptide	X	X 44.0 cM	11977
Gene Ontology	ATP binding | ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | catalytic activity | cation transport | copper ion binding | copper ion transport | copper ion transporter activity | copper-exporting ATPase activity | Golgi apparatus | hydrogen/potassium-exchanging ATPase activity | hydrogen/potassium-exchanging ATPase complex | hydrolase activity | hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | integral to membrane | magnesium ion binding | membrane | metabolism | metal ion binding | metal ion transport | metal ion transporter activity
Human Homolog	ATP7A[ATPase, Cu++ transporting, alpha polypeptide (Menkes syndrome)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 35 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGACCCTGTC (35) 6.5 0.0065 P8 Cb GC AGACTGACAT (3) 4.9 0.0049 P8 Cb GC CTTTGTTTTA 3.3 0.0033 P8 Cb GC TATGTGTGTG (19) 1.6 0.0016 Cb medulloblastoma AGACCCTGTC (35) 20.8 0.0208 Cb medulloblastoma AGACTGACAT (3) 4.6 0.0046 P8 GC+1d culture TATGTGTGTG (19) 5.7 0.0057 P8 GC+1d culture AGACCCTGTC (35) 4.6 0.0046 P8 GC+SHH+1d culture TATGTGTGTG (19) 8.2 0.0082 P8 GC+SHH+1d culture AGACCCTGTC (35) 1.2 0.0012 3T3 fibroblasts TATGTGTGTG (19) 3.5 0.0035 E15 cortex AGACCCTGTC (35) 14.8 0.0148 P1 cortex TATGTGTGTG (19) 9.1 0.0091 P1 cortex AGACCCTGTC (35) 4.5 0.0045 Hypothalamus AGACCCTGTC (35) 1.8 0.0018 E12.5 retina AGACCCTGTC (35) 5.6 0.0056 E12.5 retina TATGTGTGTG (19) 1.9 0.0019 E14.5 retina AGACCCTGTC (35) 5.5 0.0055 E16.5 retina AGACCCTGTC (35) 3.6 0.0036 E16.5 retina CTTTGTTTTA 1.8 0.0018 E18.5 retina AGACCCTGTC (35) 10.9 0.0109 E18.5 retina AGACTGACAT (3) 1.8 0.0018 P0.5 retina TATGTGTGTG (19) 3.9 0.0039 P0.5 retina AGACCCTGTC (35) 2 0.002 P2.5 retina AGACCCTGTC (35) 12.3 0.0123 P2.5 retina TATGTGTGTG (19) 1.8 0.0018 P4.5 retina AGACCCTGTC (35) 7.9 0.0079 P6.5 retina AGACCCTGTC (35) 6.7 0.0067 P10.5 crx- retina AGACCCTGTC (35) 1.9 0.0019 P10.5 crx- retina TATGTGTGTG (19) 1.9 0.0019 P10.5 crx+ retina AGACCCTGTC (35) 11.5 0.0115 P10.5 crx+ retina TATGTGTGTG (19) 1.9 0.0019 Adult retinal AGACCCTGTC (35) 13 0.013 Adult retinal TATGTGTGTG (19) 1.9 0.0019 ONL AGACCCTGTC (35) 17.2 0.0172