Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.254438	D15Ertd55e	DNA segment, Chr 15, ERATO Doi 55, expressed	15	15 49.9 cM	52458
Mm.254438	LOC380958	similar to bromodomain containing protein 1; BR140-like gene	15		380958
Mm.254438	Brd1	bromodomain containing 1	15		223770
Gene Ontology	biological_process unknown | molecular_function unknown | nucleus
Human Homolog	BRD1[bromodomain containing 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 45 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTGTAATAT (5) 6.5 0.0065 P8 Cb GC TGATGTATAT (4) 3.3 0.0033 Cb medulloblastoma TGATGTATAT (4) 2.3 0.0023 Cb medulloblastoma TTTGTAATAT (5) 2.3 0.0023 P8 GC+1d culture TGATGTATAT (4) 3.4 0.0034 P8 GC+1d culture TAGATTTAAA (3) 1.1 0.0011 P8 GC+1d culture TTTGTAATAT (5) 1.1 0.0011 P8 GC+1d culture TTTGTATATT (3) 1.1 0.0011 P8 GC+SHH+1d culture TTTGTAATAT (5) 5.9 0.0059 P8 GC+SHH+1d culture TGATGTATAT (4) 2.3 0.0023 P8 GC+SHH+1d culture TAGATTTAAA (3) 1.2 0.0012 3T3 fibroblasts TGATGTATAT (4) 3.5 0.0035 Hypothalamus TGATGTATAT (4) 12.7 0.0127 Hypothalamus TAGATTTAAA (3) 1.8 0.0018 Hypothalamus TGGATTTCCA (5) 1.8 0.0018 Hypothalamus TTTGTAATAT (5) 1.8 0.0018 Hypothalamus TTTGTATATT (3) 1.8 0.0018 E12.5 retina TGATGTATAT (4) 13.1 0.0131 E12.5 retina TACCATACAA (7) 1.9 0.0019 E12.5 retina TTTGTATATT (3) 1.9 0.0019 E14.5 retina TGATGTATAT (4) 25.5 0.0255 E14.5 retina TACCATACAA (7) 1.8 0.0018 E16.5 retina TGATGTATAT (4) 25.4 0.0254 E18.5 retina TGATGTATAT (4) 38.2 0.0382 E18.5 retina TACCATACAA (7) 1.8 0.0018 E18.5 retina TAGATTTAAA (3) 1.8 0.0018 P0.5 retina TGATGTATAT (4) 9.8 0.0098 P0.5 retina AATCATCTGA (7) 3.9 0.0039 P0.5 retina TACCATACAA (7) 2 0.002 P2.5 retina TGATGTATAT (4) 10.6 0.0106 P2.5 retina TTTGTAATAT (5) 7 0.007 P2.5 retina AATCATCTGA (7) 1.8 0.0018 P2.5 retina TAGATTTAAA (3) 1.8 0.0018 P2.5 retina TTTGTATATT (3) 1.8 0.0018 P4.5 retina TGATGTATAT (4) 15.9 0.0159 P4.5 retina TTTGTAATAT (5) 5.9 0.0059 P6.5 retina TGATGTATAT (4) 3.3 0.0033 P6.5 retina TGGATTTCCA (5) 3.3 0.0033 P6.5 retina TTTGTAATAT (5) 3.3 0.0033 P10.5 crx- retina TGATGTATAT (4) 11.1 0.0111 P10.5 crx+ retina TGATGTATAT (4) 11.5 0.0115 P10.5 crx+ retina TAGATTTAAA (3) 1.9 0.0019 P10.5 crx+ retina TTTGTAATAT (5) 1.9 0.0019 Adult retinal TTTGTAATAT (5) 1.9 0.0019 ONL TTTGTAATAT (5) 1.9 0.0019