Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.254494
8030476L19Rik
RIKEN cDNA 8030476L19 gene
15
77167
Mm.254494
Ptk2
PTK2 protein tyrosine kinase 2
15
15 D3 (15 42.0 cM)
14083
Mm.254494
1700085D07Rik
RIKEN cDNA 1700085D07 gene
15
73491
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 15 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 75 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTGACTCTTA
(
3
)
14.7
0.0147
P8 Cb GC
GGGTTTGGAA (
6
)
8.2
0.0082
P8 Cb GC
TAAAAACTGT (
5
)
6.5
0.0065
P8 Cb GC
GCTTTAATTA
(
7
)
3.3
0.0033
P8 Cb GC
CATTCTGTTA
(
3
)
1.6
0.0016
Cb medulloblastoma
GGGTTTGGAA (
6
)
9.2
0.0092
P8 GC+1d culture
GGGTTTGGAA (
6
)
8
0.008
P8 GC+1d culture
TAAAAACTGT (
5
)
5.7
0.0057
P8 GC+1d culture
TTGACTCTTA
(
3
)
3.4
0.0034
P8 GC+1d culture
AAGGGAAATA (
8
)
1.1
0.0011
P8 GC+1d culture
TGGCAGCCAG (
8
)
1.1
0.0011
P8 GC+SHH+1d culture
TTGACTCTTA
(
3
)
10.5
0.0105
P8 GC+SHH+1d culture
GGGTTTGGAA (
6
)
5.9
0.0059
P8 GC+SHH+1d culture
AAGGGAAATA (
8
)
1.2
0.0012
P8 GC+SHH+1d culture
CATTCTGTTA
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
GAGACTGGTT
(
5
)
1.2
0.0012
P8 GC+SHH+1d culture
GCTTTAATTA
(
7
)
1.2
0.0012
P8 GC+SHH+1d culture
TAAAAACTGT (
5
)
1.2
0.0012
P8 GC+SHH+1d culture
TGGCAGCCAG (
8
)
1.2
0.0012
E15 cortex
GGGTTTGGAA (
6
)
4.9
0.0049
E15 cortex
TTGACTCTTA
(
3
)
4.9
0.0049
P1 cortex
TTGACTCTTA
(
3
)
13.6
0.0136
P1 cortex
CATTCTGTTA
(
3
)
4.5
0.0045
P1 cortex
GGGTTTGGAA (
6
)
4.5
0.0045
Hypothalamus
GAGACTGGTT
(
5
)
1.8
0.0018
Hypothalamus
GGGTTTGGAA (
6
)
1.8
0.0018
Hypothalamus
TAAAAACTGT (
5
)
1.8
0.0018
Hypothalamus
TGGCAGCCAG (
8
)
1.8
0.0018
E12.5 retina
GGGTTTGGAA (
6
)
11.3
0.0113
E12.5 retina
CATTCTGTTA
(
3
)
5.6
0.0056
E12.5 retina
TAAAAACTGT (
5
)
3.8
0.0038
E12.5 retina
TTGACTCTTA
(
3
)
3.8
0.0038
E12.5 retina
GAGGGAAGAA (
8
)
1.9
0.0019
E14.5 retina
TAAAAACTGT (
5
)
3.6
0.0036
E14.5 retina
TTGACTCTTA
(
3
)
3.6
0.0036
E14.5 retina
CATTCTGTTA
(
3
)
1.8
0.0018
E14.5 retina
GGGTTTGGAA (
6
)
1.8
0.0018
E14.5 retina
GTTTTGATTT
(
6
)
1.8
0.0018
E16.5 retina
TTGACTCTTA
(
3
)
7.2
0.0072
E16.5 retina
GGGTTTGGAA (
6
)
5.4
0.0054
E16.5 retina
CATTCTGTTA
(
3
)
1.8
0.0018
E16.5 retina
GCTTTAATTA
(
7
)
1.8
0.0018
E18.5 retina
TTGACTCTTA
(
3
)
5.5
0.0055
E18.5 retina
GGGTTTGGAA (
6
)
3.6
0.0036
E18.5 retina
TAAAAACTGT (
5
)
3.6
0.0036
E18.5 retina
GAGGGAAGAA (
8
)
1.8
0.0018
P0.5 retina
GGGTTTGGAA (
6
)
3.9
0.0039
P0.5 retina
CATTCTGTTA
(
3
)
2
0.002
P0.5 retina
GTTTTGATTT
(
6
)
2
0.002
P0.5 retina
TTGACTCTTA
(
3
)
2
0.002
P2.5 retina
GGGTTTGGAA (
6
)
12.3
0.0123
P2.5 retina
GAGACTGGTT
(
5
)
1.8
0.0018
P2.5 retina
TAAAAACTGT (
5
)
1.8
0.0018
P2.5 retina
TTGACTCTTA
(
3
)
1.8
0.0018
P4.5 retina
TTGACTCTTA
(
3
)
17.8
0.0178
P4.5 retina
GGGTTTGGAA (
6
)
15.9
0.0159
P4.5 retina
CATTCTGTTA
(
3
)
2
0.002
P4.5 retina
GAGGGAAGAA (
8
)
2
0.002
P6.5 retina
GGGTTTGGAA (
6
)
11.7
0.0117
P6.5 retina
TTGACTCTTA
(
3
)
8.3
0.0083
P6.5 retina
GTTTTGATTT
(
6
)
1.7
0.0017
P6.5 retina
TGGCAGCCAG (
8
)
1.7
0.0017
P10.5 crx- retina
CATTCTGTTA
(
3
)
1.9
0.0019
P10.5 crx- retina
GGGTTTGGAA (
6
)
1.9
0.0019
P10.5 crx+ retina
GGGTTTGGAA (
6
)
3.8
0.0038
P10.5 crx+ retina
CATTCTGTTA
(
3
)
1.9
0.0019
P10.5 crx+ retina
GTTTTGATTT
(
6
)
1.9
0.0019
P10.5 crx+ retina
TAAAAACTGT (
5
)
1.9
0.0019
P10.5 crx+ retina
TTGACTCTTA
(
3
)
1.9
0.0019
Adult retinal
TAAAAACTGT (
5
)
1.9
0.0019
Adult retinal
TTGACTCTTA
(
3
)
1.9
0.0019
ONL
GGGTTTGGAA (
6
)
3.8
0.0038
ONL
AAGGGAAATA (
8
)
1.9
0.0019
ONL
TGGCAGCCAG (
8
)
1.9
0.0019
ONL
TTGACTCTTA
(
3
)
1.9
0.0019
