Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.25504	D2Bwg0886e	DNA segment, Chr 2, Brigham & Women's Genetics 0886 expressed	2	2 24.0 cM	52841
Mm.25504	E030004H24Rik	RIKEN cDNA E030004H24 gene	2		319424
Mm.25504	5830434P21Rik	RIKEN cDNA 5830434P21 gene	2	2 B	227723
Human Homolog	KIAA0515[KIAA0515]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 9 In Situ Hybridization Images

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SAGE Tags

Total 133 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTTTCTCAAA (3) 11.4 0.0114 P8 Cb GC CACCCCAGCC (4) 3.3 0.0033 P8 Cb GC GAGACAGTGT (6) 3.3 0.0033 P8 Cb GC AAAGTGGCAG (6) 1.6 0.0016 P8 Cb GC AGAGCAGAGA (7) 1.6 0.0016 P8 Cb GC GAGAAGCAGC (13) 1.6 0.0016 P8 Cb GC GCCTTTGGTG (9) 1.6 0.0016 P8 Cb GC GGCACAGCTG (5) 1.6 0.0016 P8 Cb GC GGCTTTGGTG (9) 1.6 0.0016 P8 Cb GC TTCTTGGAAG (6) 1.6 0.0016 Cb medulloblastoma CTTTCTCAAA (3) 6.9 0.0069 Cb medulloblastoma TGGGGTCTGT (5) 6.9 0.0069 Cb medulloblastoma GTTGGAAAAA (4) 4.6 0.0046 Cb medulloblastoma GAGACAGTGT (6) 2.3 0.0023 Cb medulloblastoma GGCACAGCTG (5) 2.3 0.0023 Cb medulloblastoma GGCTTTGGTG (9) 2.3 0.0023 P8 GC+1d culture TGGGGTCTGT (5) 8 0.008 P8 GC+1d culture TCACAATCCT (3) 5.7 0.0057 P8 GC+1d culture CTTTCTCAAA (3) 4.6 0.0046 P8 GC+1d culture AGAGCAGAGA (7) 2.3 0.0023 P8 GC+1d culture GTTTGGCAAC (3) 1.1 0.0011 P8 GC+1d culture TTTGGCTTTA (7) 1.1 0.0011 P8 GC+SHH+1d culture CTTTCTCAAA (3) 11.7 0.0117 P8 GC+SHH+1d culture TGGGGTCTGT (5) 7 0.007 P8 GC+SHH+1d culture GGCTTTGGTG (9) 3.5 0.0035 P8 GC+SHH+1d culture TCACAATCCT (3) 3.5 0.0035 P8 GC+SHH+1d culture TTTGGCTTTA (7) 3.5 0.0035 P8 GC+SHH+1d culture TCTTTCCCCA (4) 2.3 0.0023 P8 GC+SHH+1d culture AAAGTGGCAG (6) 1.2 0.0012 P8 GC+SHH+1d culture AGAGCAGAGA (7) 1.2 0.0012 3T3 fibroblasts GGCTTTGGTG (9) 14 0.014 3T3 fibroblasts CACCCCAGCC (4) 7 0.007 3T3 fibroblasts GGCACAGCTG (5) 7 0.007 3T3 fibroblasts AGAGCAGAGA (7) 3.5 0.0035 3T3 fibroblasts GTTTGGCAAC (3) 3.5 0.0035 3T3 fibroblasts TCACAATCCT (3) 3.5 0.0035 E15 cortex CACCCCAGCC (4) 4.9 0.0049 E15 cortex CTTTCTCAAA (3) 4.9 0.0049 E15 cortex GAGAAGCAGC (13) 4.9 0.0049 E15 cortex TGGGGTCTGT (5) 4.9 0.0049 P1 cortex TCACAATCCT (3) 9.1 0.0091 P1 cortex AGAGCAGAGA (7) 4.5 0.0045 P1 cortex GGCACAGCTG (5) 4.5 0.0045 P1 cortex TGGGGTCTGT (5) 4.5 0.0045 P1 cortex TTCTTGGAAG (6) 4.5 0.0045 Hypothalamus GGCTTTGGTG (9) 7.2 0.0072 Hypothalamus TGGGGTCTGT (5) 7.2 0.0072 Hypothalamus AGAGCAGAGA (7) 3.6 0.0036 Hypothalamus CTTTCTCAAA (3) 3.6 0.0036 Hypothalamus GGCACAGCTG (5) 1.8 0.0018 Hypothalamus TCACAATCCT (3) 1.8 0.0018 E12.5 retina GGCTTTGGTG (9) 7.5 0.0075 E12.5 retina CACCCCAGCC (4) 1.9 0.0019 E12.5 retina CTTTCTCAAA (3) 1.9 0.0019 E12.5 retina GAGAAGCAGC (13) 1.9 0.0019 E12.5 retina TCTTTCCCCA (4) 1.9 0.0019 E12.5 retina TTTGGCTTTA (7) 1.9 0.0019 E14.5 retina GGCTTTGGTG (9) 16.4 0.0164 E14.5 retina CTTTCTCAAA (3) 7.3 0.0073 E14.5 retina CTCCCAGCGT (4) 1.8 0.0018 E14.5 retina GCCTTTGGTG (9) 1.8 0.0018 E14.5 retina GGCACAGCTG (5) 1.8 0.0018 E14.5 retina GTTGGAAAAA (4) 1.8 0.0018 E14.5 retina TCACAATCCT (3) 1.8 0.0018 E14.5 retina TGGGGTCTGT (5) 1.8 0.0018 E14.5 retina TTCTTGGAAG (6) 1.8 0.0018 E16.5 retina GGCTTTGGTG (9) 18.1 0.0181 E16.5 retina CTTTCTCAAA (3) 9.1 0.0091 E16.5 retina CTCCCAGCGT (4) 7.2 0.0072 E16.5 retina AAAGTGGCAG (6) 1.8 0.0018 E16.5 retina GAGACAGTGT (6) 1.8 0.0018 E16.5 retina GGCACAGCTG (5) 1.8 0.0018 E16.5 retina GTTGGAAAAA (4) 1.8 0.0018 E16.5 retina TCTTTCCCCA (4) 1.8 0.0018 E18.5 retina CTTTCTCAAA (3) 20 0.02 E18.5 retina TGGGGTCTGT (5) 5.5 0.0055 E18.5 retina CACCCCAGCC (4) 1.8 0.0018 E18.5 retina GGCACAGCTG (5) 1.8 0.0018 E18.5 retina GTTGGAAAAA (4) 1.8 0.0018 E18.5 retina TCACAATCCT (3) 1.8 0.0018 P0.5 retina GGCTTTGGTG (9) 9.8 0.0098 P0.5 retina TGGGGTCTGT (5) 7.9 0.0079 P0.5 retina CTTTCTCAAA (3) 5.9 0.0059 P0.5 retina TCACAATCCT (3) 5.9 0.0059 P0.5 retina AGAGCAGAGA (7) 3.9 0.0039 P0.5 retina GGCACAGCTG (5) 3.9 0.0039 P0.5 retina CTCCCAGCGT (4) 2 0.002 P0.5 retina GCCTTTGGTG (9) 2 0.002 P0.5 retina GTTTGGCAAC (3) 2 0.002 P0.5 retina TCTTTCCCCA (4) 2 0.002 P0.5 retina TTCTTGGAAG (6) 2 0.002 P2.5 retina CTTTCTCAAA (3) 7 0.007 P2.5 retina TCACAATCCT (3) 3.5 0.0035 P2.5 retina AGAGCAGAGA (7) 1.8 0.0018 P2.5 retina GCCTTTGGTG (9) 1.8 0.0018 P2.5 retina GGCACAGCTG (5) 1.8 0.0018 P2.5 retina TCTTTCCCCA (4) 1.8 0.0018 P4.5 retina TGGGGTCTGT (5) 5.9 0.0059 P4.5 retina CTTTCTCAAA (3) 4 0.004 P4.5 retina AGAGCAGAGA (7) 2 0.002 P4.5 retina CACCCCAGCC (4) 2 0.002 P4.5 retina GGCACAGCTG (5) 2 0.002 P4.5 retina GGCTTTGGTG (9) 2 0.002 P4.5 retina TCACAATCCT (3) 2 0.002 P6.5 retina CTTTCTCAAA (3) 11.7 0.0117 P6.5 retina TGGGGTCTGT (5) 6.7 0.0067 P6.5 retina CTCCCAGCGT (4) 1.7 0.0017 P6.5 retina GCCTTTGGTG (9) 1.7 0.0017 P6.5 retina TCACAATCCT (3) 1.7 0.0017 P6.5 retina TTTGGCTTTA (7) 1.7 0.0017 P10.5 crx- retina GGCACAGCTG (5) 9.3 0.0093 P10.5 crx- retina TGGGGTCTGT (5) 7.4 0.0074 P10.5 crx- retina GGCTTTGGTG (9) 3.7 0.0037 P10.5 crx- retina CACCCCAGCC (4) 1.9 0.0019 P10.5 crx- retina TCACAATCCT (3) 1.9 0.0019 P10.5 crx+ retina TGGGGTCTGT (5) 9.6 0.0096 P10.5 crx+ retina CTTTCTCAAA (3) 5.8 0.0058 P10.5 crx+ retina GGCACAGCTG (5) 5.8 0.0058 P10.5 crx+ retina GGCTTTGGTG (9) 5.8 0.0058 P10.5 crx+ retina AGAGCAGAGA (7) 1.9 0.0019 P10.5 crx+ retina CACCCCAGCC (4) 1.9 0.0019 P10.5 crx+ retina GTTGGAAAAA (4) 1.9 0.0019 Adult retinal TGGGGTCTGT (5) 13 0.013 Adult retinal CTTTCTCAAA (3) 3.7 0.0037 Adult retinal GGCACAGCTG (5) 3.7 0.0037 Adult retinal AGAGCAGAGA (7) 1.9 0.0019 Adult retinal CACCCCAGCC (4) 1.9 0.0019 Adult retinal CTCCCAGCGT (4) 1.9 0.0019 Adult retinal GAGAAGCAGC (13) 1.9 0.0019 Adult retinal TCACAATCCT (3) 1.9 0.0019 Adult retinal TTTGGCTTTA (7) 1.9 0.0019 ONL CTTTCTCAAA (3) 5.7 0.0057 ONL TCACAATCCT (3) 1.9 0.0019