Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.25531
2600014C01Rik
RIKEN cDNA 2600014C01 gene
10
70297
Mm.25531
2610202C22Rik
RIKEN cDNA 2610202C22 gene
10
72493
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 37 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ATAAAAAAAA (
33
)
11.4
0.0114
P8 Cb GC
TTCCTGAATT (
8
)
4.9
0.0049
Cb medulloblastoma
ATAAAAAAAA (
33
)
25.4
0.0254
Cb medulloblastoma
ATAAAAATTA
(
8
)
2.3
0.0023
P8 GC+1d culture
ATAAAAAAAA (
33
)
5.7
0.0057
P8 GC+1d culture
ATAAAAATTA
(
8
)
4.6
0.0046
P8 GC+SHH+1d culture
ATAAAAAAAA (
33
)
21.1
0.0211
P8 GC+SHH+1d culture
ATAAAAATTA
(
8
)
2.3
0.0023
Hypothalamus
ATAAAAAAAA (
33
)
7.2
0.0072
Hypothalamus
ATAAAAATTA
(
8
)
1.8
0.0018
Hypothalamus
GATGCCGCTG (
4
)
1.8
0.0018
E12.5 retina
ATAAAAAAAA (
33
)
11.3
0.0113
E12.5 retina
GATGCCGCTG (
4
)
1.9
0.0019
E14.5 retina
ATAAAAAAAA (
33
)
16.4
0.0164
E14.5 retina
ATAAAAATTA
(
8
)
3.6
0.0036
E14.5 retina
TTCCTGAATT (
8
)
1.8
0.0018
E16.5 retina
ATAAAAAAAA (
33
)
5.4
0.0054
E16.5 retina
ATAAAAATTA
(
8
)
3.6
0.0036
E16.5 retina
GATGCCGCTG (
4
)
1.8
0.0018
E16.5 retina
TTCCTGAATT (
8
)
1.8
0.0018
E18.5 retina
ATAAAAAAAA (
33
)
30.9
0.0309
P0.5 retina
ATAAAAAAAA (
33
)
2
0.002
P2.5 retina
ATAAAAAAAA (
33
)
14.1
0.0141
P2.5 retina
ACCCCAGAGG
(
3
)
1.8
0.0018
P2.5 retina
ATAAAAATTA
(
8
)
1.8
0.0018
P4.5 retina
ATAAAAAAAA (
33
)
21.8
0.0218
P4.5 retina
TTCCTGAATT (
8
)
2
0.002
P6.5 retina
ATAAAAAAAA (
33
)
10
0.01
P6.5 retina
TTCCTGAATT (
8
)
1.7
0.0017
P10.5 crx- retina
ATAAAAAAAA (
33
)
5.6
0.0056
P10.5 crx- retina
ATAAAAATTA
(
8
)
3.7
0.0037
P10.5 crx- retina
GATGCCGCTG (
4
)
1.9
0.0019
P10.5 crx+ retina
ATAAAAAAAA (
33
)
3.8
0.0038
Adult retinal
ACCCCAGAGG
(
3
)
3.7
0.0037
ONL
ATAAAAATTA
(
8
)
3.8
0.0038
ONL
ATAAAAAAAA (
33
)
1.9
0.0019
ONL
TTCCTGAATT (
8
)
1.9
0.0019
