Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.255539	Rad23a	RAD23a homolog (S. cerevisiae)	8		19358
Gene Ontology	DNA repair | nucleotide-excision repair | nucleus | response to DNA damage stimulus
Human Homolog	RAD23A[RAD23 homolog A (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 73 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTAAAAAAA (9) 3.3 0.0033 P8 Cb GC ATGAGGGGAA (4) 1.6 0.0016 P8 Cb GC GCTGGCTGGC (10) 1.6 0.0016 Cb medulloblastoma CCTAAAAAAA (9) 4.6 0.0046 Cb medulloblastoma ATGAGGGGAA (4) 2.3 0.0023 P8 GC+1d culture GCCAAGATGC (3) 2.3 0.0023 P8 GC+1d culture ATGAGGGGAA (4) 1.1 0.0011 P8 GC+1d culture CCTAAAAAAA (9) 1.1 0.0011 P8 GC+1d culture CGGCAAGTGA 1.1 0.0011 P8 GC+1d culture GAAATAAGCC 1.1 0.0011 P8 GC+1d culture GCTGGCTGGC (10) 1.1 0.0011 P8 GC+1d culture GTGAGACAAA (2) 1.1 0.0011 P8 GC+SHH+1d culture ATGAGGGGAA (4) 2.3 0.0023 P8 GC+SHH+1d culture GCCAAGATGC (3) 1.2 0.0012 P8 GC+SHH+1d culture GCTGGCTGGC (10) 1.2 0.0012 3T3 fibroblasts GCCAAGATGC (3) 3.5 0.0035 3T3 fibroblasts GCTGGCTGGC (10) 3.5 0.0035 3T3 fibroblasts GGCTACGAGC (3) 3.5 0.0035 E15 cortex GCCAAGATGC (3) 14.8 0.0148 P1 cortex GCCAAGATGC (3) 9.1 0.0091 P1 cortex ATGAGGGGAA (4) 4.5 0.0045 P1 cortex GCTGGCTGGC (10) 4.5 0.0045 Hypothalamus GCCAAGATGC (3) 3.6 0.0036 Hypothalamus ATGAGGGGAA (4) 1.8 0.0018 Hypothalamus GTGAGACAAA (2) 1.8 0.0018 E14.5 retina AGCGTCTGCA (15) 1.8 0.0018 E14.5 retina GCTGGCTGGC (10) 1.8 0.0018 E14.5 retina GGTCTGTCCA (9) 1.8 0.0018 E16.5 retina CCTAAAAAAA (9) 1.8 0.0018 E16.5 retina GAAATAAGCC 1.8 0.0018 E16.5 retina GCCAAGATGC (3) 1.8 0.0018 E16.5 retina GGCTACGAGC (3) 1.8 0.0018 E18.5 retina CCTAAAAAAA (9) 3.6 0.0036 E18.5 retina GGCTACGAGC (3) 1.8 0.0018 E18.5 retina GTGAGACAAA (2) 1.8 0.0018 P0.5 retina ATGAGGGGAA (4) 5.9 0.0059 P0.5 retina CCTAAAAAAA (9) 5.9 0.0059 P0.5 retina GCCAAGATGC (3) 3.9 0.0039 P0.5 retina CGGCAAGTGA 2 0.002 P0.5 retina GAACCTGACG (3) 2 0.002 P0.5 retina GCTGGCTGGC (10) 2 0.002 P2.5 retina GAAATAAGCC 5.3 0.0053 P2.5 retina ATGAGGGGAA (4) 3.5 0.0035 P2.5 retina GTGAGACAAA (2) 3.5 0.0035 P2.5 retina GCCAAGATGC (3) 1.8 0.0018 P4.5 retina ATGAGGGGAA (4) 4 0.004 P4.5 retina GCCAAGATGC (3) 4 0.004 P4.5 retina GTGAGACAAA (2) 4 0.004 P4.5 retina CCTAAAAAAA (9) 2 0.002 P6.5 retina AGCGTCTGCA (15) 1.7 0.0017 P6.5 retina ATGAGGGGAA (4) 1.7 0.0017 P6.5 retina CCTAAAAAAA (9) 1.7 0.0017 P6.5 retina CGGCAAGTGA 1.7 0.0017 P6.5 retina GAAATAAGCC 1.7 0.0017 P6.5 retina GAACCTGACG (3) 1.7 0.0017 P10.5 crx- retina GCCAAGATGC (3) 3.7 0.0037 P10.5 crx- retina ATGAGGGGAA (4) 1.9 0.0019 P10.5 crx- retina CCTAAAAAAA (9) 1.9 0.0019 P10.5 crx- retina GAACCTGACG (3) 1.9 0.0019 P10.5 crx- retina GTGAGACAAA (2) 1.9 0.0019 P10.5 crx+ retina AGCGTCTGCA (15) 13.5 0.0135 P10.5 crx+ retina CCTAAAAAAA (9) 3.8 0.0038 P10.5 crx+ retina GCTGGCTGGC (10) 3.8 0.0038 P10.5 crx+ retina GCCAAGATGC (3) 1.9 0.0019 Adult retinal AGCGTCTGCA (15) 42.6 0.0426 Adult retinal GCCAAGATGC (3) 11.1 0.0111 Adult retinal ATGAGGGGAA (4) 7.4 0.0074 Adult retinal CCTAAAAAAA (9) 3.7 0.0037 Adult retinal GAACCTGACG (3) 1.9 0.0019 ONL AGCGTCTGCA (15) 67 0.067 ONL ATGAGGGGAA (4) 3.8 0.0038 ONL GGTCTGTCCA (9) 3.8 0.0038 ONL GCCAAGATGC (3) 1.9 0.0019