Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.255822	C78441	expressed sequence C78441	3		97065
Mm.255822	Camk2d	calcium/calmodulin-dependent protein kinase II, delta	3	3 G2	108058
Gene Ontology	ATP binding | autophosphorylation | calcium ion transport | G1/S transition of mitotic cell cycle | kinase activity | protein serine/threonine kinase activity | transferase activity
Human Homolog	CAMK2D[calcium/calmodulin-dependent protein kinase (CaM kinase) II delta]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 5 In Situ Hybridization Images

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SAGE Tags

Total 104 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAATAAAAC (5) 3.3 0.0033 P8 Cb GC GCAAGCTGTT (8) 1.6 0.0016 P8 Cb GC GGACACTGTA (3) 1.6 0.0016 Cb medulloblastoma TAAATAAAAC (5) 11.6 0.0116 Cb medulloblastoma GGACACTGTA (3) 6.9 0.0069 Cb medulloblastoma CTAAGTTAAA (3) 4.6 0.0046 Cb medulloblastoma TATTTAAAAA (8) 4.6 0.0046 Cb medulloblastoma GCAAGCTGTT (8) 2.3 0.0023 Cb medulloblastoma GTAGGATCTT (3) 2.3 0.0023 Cb medulloblastoma TTGATTTGGG (2) 2.3 0.0023 P8 GC+1d culture GGACACTGTA (3) 3.4 0.0034 P8 GC+1d culture TAAATAAAAC (5) 2.3 0.0023 P8 GC+1d culture CTAAGTTAAA (3) 1.1 0.0011 P8 GC+1d culture TTGATTTGGG (2) 1.1 0.0011 P8 GC+SHH+1d culture TAAATAAAAC (5) 5.9 0.0059 P8 GC+SHH+1d culture GGACACTGTA (3) 2.3 0.0023 P8 GC+SHH+1d culture TTGATTTGGG (2) 2.3 0.0023 P8 GC+SHH+1d culture CTAAGTTAAA (3) 1.2 0.0012 P8 GC+SHH+1d culture GCCCTGAAAA (9) 1.2 0.0012 P8 GC+SHH+1d culture GTAGGATCTT (3) 1.2 0.0012 P8 GC+SHH+1d culture TATTTAAAAA (8) 1.2 0.0012 3T3 fibroblasts GCCATCAGGA (8) 7 0.007 3T3 fibroblasts GCCCTGAAAA (9) 3.5 0.0035 E15 cortex TAAATAAAAC (5) 4.9 0.0049 P1 cortex AATATACATA (4) 13.6 0.0136 P1 cortex TAAATAAAAC (5) 9.1 0.0091 P1 cortex TTGATTTGGG (2) 9.1 0.0091 P1 cortex GCCCTGAAAA (9) 4.5 0.0045 P1 cortex GGACACTGTA (3) 4.5 0.0045 Hypothalamus TAAATAAAAC (5) 9.1 0.0091 Hypothalamus GGACACTGTA (3) 5.4 0.0054 Hypothalamus CAAACTTCCG (2) 3.6 0.0036 Hypothalamus CAGTCAAAAA (4) 1.8 0.0018 Hypothalamus CTGCTTTTCA (7) 1.8 0.0018 Hypothalamus GCCCTGAAAA (9) 1.8 0.0018 Hypothalamus GGTGTGAAGG (7) 1.8 0.0018 E12.5 retina TAAATAAAAC (5) 5.6 0.0056 E12.5 retina CAGTCAAAAA (4) 1.9 0.0019 E12.5 retina GCCCTGAAAA (9) 1.9 0.0019 E12.5 retina GTAGGATCTT (3) 1.9 0.0019 E14.5 retina TAAATAAAAC (5) 18.2 0.0182 E14.5 retina AATATACATA (4) 1.8 0.0018 E14.5 retina CAGTCAAAAA (4) 1.8 0.0018 E14.5 retina CTGCTTTTCA (7) 1.8 0.0018 E14.5 retina GGACACTGTA (3) 1.8 0.0018 E14.5 retina GTAGGATCTT (3) 1.8 0.0018 E16.5 retina CTAAGTTAAA (3) 1.8 0.0018 E16.5 retina CTGCTTTTCA (7) 1.8 0.0018 E16.5 retina GTAGGATCTT (3) 1.8 0.0018 E18.5 retina TAAATAAAAC (5) 14.6 0.0146 E18.5 retina TATTTAAAAA (8) 3.6 0.0036 E18.5 retina CCTGTCATTT (4) 1.8 0.0018 E18.5 retina GCCATCAGGA (8) 1.8 0.0018 P0.5 retina GTAGGATCTT (3) 3.9 0.0039 P0.5 retina TAAATAAAAC (5) 3.9 0.0039 P0.5 retina GCCCTGAAAA (9) 2 0.002 P0.5 retina TTGATTTGGG (2) 2 0.002 P2.5 retina TAAATAAAAC (5) 7 0.007 P2.5 retina GTAAACTGCA (2) 5.3 0.0053 P2.5 retina TATTTAAAAA (8) 5.3 0.0053 P2.5 retina CCTGTCATTT (4) 1.8 0.0018 P2.5 retina TACTGTTTTC (4) 1.8 0.0018 P4.5 retina GGACACTGTA (3) 5.9 0.0059 P4.5 retina TAAATAAAAC (5) 5.9 0.0059 P4.5 retina CTAAGTTAAA (3) 2 0.002 P4.5 retina GCCCTGAAAA (9) 2 0.002 P4.5 retina TACTGTTTTC (4) 2 0.002 P6.5 retina TAAATAAAAC (5) 8.3 0.0083 P6.5 retina GCCCTGAAAA (9) 5 0.005 P6.5 retina GGTGTGAAGG (7) 3.3 0.0033 P6.5 retina AATATACATA (4) 1.7 0.0017 P6.5 retina CCTGTCATTT (4) 1.7 0.0017 P6.5 retina GCAAGCTGTT (8) 1.7 0.0017 P6.5 retina GGACACTGTA (3) 1.7 0.0017 P6.5 retina TACTGTTTTC (4) 1.7 0.0017 P6.5 retina TATTTAAAAA (8) 1.7 0.0017 P6.5 retina TTGATTTGGG (2) 1.7 0.0017 P10.5 crx- retina GCCCTGAAAA (9) 11.1 0.0111 P10.5 crx- retina GGACACTGTA (3) 11.1 0.0111 P10.5 crx- retina TAAATAAAAC (5) 3.7 0.0037 P10.5 crx- retina CTAAGTTAAA (3) 1.9 0.0019 P10.5 crx- retina GGTGTGAAGG (7) 1.9 0.0019 P10.5 crx- retina TATTTAAAAA (8) 1.9 0.0019 P10.5 crx- retina TTGATTTGGG (2) 1.9 0.0019 P10.5 crx+ retina GGACACTGTA (3) 11.5 0.0115 P10.5 crx+ retina GCCCTGAAAA (9) 7.7 0.0077 P10.5 crx+ retina GTAAACTGCA (2) 3.8 0.0038 P10.5 crx+ retina TTGATTTGGG (2) 3.8 0.0038 P10.5 crx+ retina CTAAGTTAAA (3) 1.9 0.0019 P10.5 crx+ retina GGTGTGAAGG (7) 1.9 0.0019 Adult retinal GCCCTGAAAA (9) 9.3 0.0093 Adult retinal GGACACTGTA (3) 9.3 0.0093 Adult retinal CAAACTTCCG (2) 3.7 0.0037 Adult retinal GGTGTGAAGG (7) 3.7 0.0037 Adult retinal CTAAGTTAAA (3) 1.9 0.0019 Adult retinal TATTTAAAAA (8) 1.9 0.0019 Adult retinal TTGATTTGGG (2) 1.9 0.0019 ONL GCCCTGAAAA (9) 9.6 0.0096 ONL CAAACTTCCG (2) 5.7 0.0057 ONL CAGTCAAAAA (4) 3.8 0.0038 ONL CTAAGTTAAA (3) 3.8 0.0038 ONL GGACACTGTA (3) 3.8 0.0038 ONL GGTGTGAAGG (7) 1.9 0.0019 ONL TACTGTTTTC (4) 1.9 0.0019