Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.255877	Papola	poly (A) polymerase alpha	12		18789
Gene Ontology	mRNA processing | nucleic acid binding | nucleotidyltransferase activity | nucleus | polynucleotide adenylyltransferase activity | RNA binding | transcription | transferase activity
Human Homolog	PAPOLA[poly(A) polymerase alpha]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 98 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAAAAAAAA (157) 47.3 0.0473 P8 Cb GC ACTGGAGTTT 8.2 0.0082 P8 Cb GC TGTACCAGGT (2) 3.3 0.0033 P8 Cb GC CCAGGCAAGC (14) 1.6 0.0016 Cb medulloblastoma CAAAAAAAAA (157) 92.5 0.0925 Cb medulloblastoma ACTGGAGTTT 6.9 0.0069 P8 GC+1d culture CAAAAAAAAA (157) 37.7 0.0377 P8 GC+1d culture ACTGGAGTTT 6.8 0.0068 P8 GC+1d culture CTCATACAAA (2) 2.3 0.0023 P8 GC+1d culture TCACCTGTTA (2) 2.3 0.0023 P8 GC+1d culture TACATTCAAA (2) 1.1 0.0011 P8 GC+SHH+1d culture CAAAAAAAAA (157) 58.5 0.0585 P8 GC+SHH+1d culture ACTGGAGTTT 5.9 0.0059 P8 GC+SHH+1d culture CCCAGGAAGG 1.2 0.0012 P8 GC+SHH+1d culture CGAAAGCAAC 1.2 0.0012 P8 GC+SHH+1d culture CTCATACAAA (2) 1.2 0.0012 P8 GC+SHH+1d culture GCTAGAACTT 1.2 0.0012 P8 GC+SHH+1d culture TACATTCAAA (2) 1.2 0.0012 P8 GC+SHH+1d culture TTGATCGAAG 1.2 0.0012 3T3 fibroblasts ACTGGAGTTT 3.5 0.0035 3T3 fibroblasts CCAGGCAAGC (14) 3.5 0.0035 E15 cortex ACTGGAGTTT 39.6 0.0396 E15 cortex CAAAAAAAAA (157) 34.6 0.0346 E15 cortex TCTGTGCCTT 4.9 0.0049 P1 cortex CAAAAAAAAA (157) 22.7 0.0227 P1 cortex TTGATCGAAG 4.5 0.0045 Hypothalamus CAAAAAAAAA (157) 39.8 0.0398 Hypothalamus ACTGGAGTTT 3.6 0.0036 Hypothalamus GCTTAGGAAA 3.6 0.0036 Hypothalamus TAACTGCATC 1.8 0.0018 Hypothalamus TTGATCCAAG 1.8 0.0018 E12.5 retina CAAAAAAAAA (157) 22.5 0.0225 E12.5 retina ACTGGAGTTT 15 0.015 E12.5 retina CTCATACAAA (2) 3.8 0.0038 E12.5 retina AGCACTTGAT 1.9 0.0019 E12.5 retina CCAGGCAAGC (14) 1.9 0.0019 E12.5 retina CCCAGGAAGG 1.9 0.0019 E12.5 retina GCTAGAACTT 1.9 0.0019 E12.5 retina GCTTAGGAAA 1.9 0.0019 E14.5 retina CAAAAAAAAA (157) 9.1 0.0091 E14.5 retina ACTGGAGTTT 7.3 0.0073 E14.5 retina CCCAGGAAGG 1.8 0.0018 E14.5 retina TACATTCAAA (2) 1.8 0.0018 E14.5 retina TCTGTGCCTT 1.8 0.0018 E16.5 retina ACTGGAGTTT 19.9 0.0199 E16.5 retina CAAAAAAAAA (157) 9.1 0.0091 E16.5 retina CGAAAGCAAC 5.4 0.0054 E16.5 retina AGCACTTGAT 1.8 0.0018 E18.5 retina CAAAAAAAAA (157) 41.8 0.0418 E18.5 retina TACATTCAAA (2) 3.6 0.0036 E18.5 retina ACTGGAGTTT 1.8 0.0018 E18.5 retina AGCACTTGAT 1.8 0.0018 E18.5 retina GCTTAGGAAA 1.8 0.0018 E18.5 retina TAACTGCATC 1.8 0.0018 P0.5 retina CAAAAAAAAA (157) 137.4 0.1374 P0.5 retina ACTGGAGTTT 7.9 0.0079 P0.5 retina CTCATACAAA (2) 3.9 0.0039 P0.5 retina TTGATCGAAG 3.9 0.0039 P0.5 retina CCCAGGAAGG 2 0.002 P0.5 retina TAACTGCATC 2 0.002 P0.5 retina TCTGTGCCTT 2 0.002 P0.5 retina TGTACCAGGT (2) 2 0.002 P2.5 retina CAAAAAAAAA (157) 52.8 0.0528 P2.5 retina ACTGGAGTTT 19.4 0.0194 P2.5 retina CCCAGGAAGG 3.5 0.0035 P2.5 retina TACATTCAAA (2) 3.5 0.0035 P2.5 retina CCAGGCAAGC (14) 1.8 0.0018 P2.5 retina CGAAAGCAAC 1.8 0.0018 P2.5 retina CTCATACAAA (2) 1.8 0.0018 P2.5 retina GCTAGAACTT 1.8 0.0018 P2.5 retina TCACCTGTTA (2) 1.8 0.0018 P4.5 retina CAAAAAAAAA (157) 41.6 0.0416 P4.5 retina ACTGGAGTTT 21.8 0.0218 P4.5 retina CTCATACAAA (2) 2 0.002 P4.5 retina TACATTCAAA (2) 2 0.002 P4.5 retina TTGATCCAAG 2 0.002 P6.5 retina CAAAAAAAAA (157) 31.7 0.0317 P6.5 retina ACTGGAGTTT 10 0.01 P6.5 retina CGAAAGCAAC 1.7 0.0017 P6.5 retina CTCATACAAA (2) 1.7 0.0017 P6.5 retina GCTTAGGAAA 1.7 0.0017 P6.5 retina TGTACCAGGT (2) 1.7 0.0017 P10.5 crx- retina ACTGGAGTTT 20.4 0.0204 P10.5 crx- retina CAAAAAAAAA (157) 13 0.013 P10.5 crx- retina GCGCCCCAGT 9.3 0.0093 P10.5 crx- retina TACATTCAAA (2) 1.9 0.0019 P10.5 crx- retina TTGATCGAAG 1.9 0.0019 P10.5 crx+ retina CAAAAAAAAA (157) 32.7 0.0327 P10.5 crx+ retina ACTGGAGTTT 7.7 0.0077 P10.5 crx+ retina CGAAAGCAAC 3.8 0.0038 P10.5 crx+ retina GCTAGAACTT 1.9 0.0019 Adult retinal CAAAAAAAAA (157) 20.4 0.0204 Adult retinal ACTGGAGTTT 13 0.013 Adult retinal CTCATACAAA (2) 1.9 0.0019 Adult retinal TTGATCGAAG 1.9 0.0019 ONL CAAAAAAAAA (157) 17.2 0.0172 ONL ACTGGAGTTT 7.7 0.0077 ONL TTGATCGAAG 1.9 0.0019