Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.255925
1110018F16Rik
RIKEN cDNA 1110018F16 gene
3
68594
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 47 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGTTGCTGG (
369
)
68.5
0.0685
P8 Cb GC
GAAGCCTGTG
(
3
)
1.6
0.0016
Cb medulloblastoma
TGGTTGCTGG (
369
)
113.3
0.1133
Cb medulloblastoma
GAAGCCTGTG
(
3
)
4.6
0.0046
P8 GC+1d culture
TGGTTGCTGG (
369
)
57.1
0.0571
P8 GC+1d culture
GAAGCCTGTG
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
TGGTTGCTGG (
369
)
89
0.089
P8 GC+SHH+1d culture
GAAGCCTGTG
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
GCAGCGCCCT
1.2
0.0012
P8 GC+SHH+1d culture
TAAAACTGTA (
6
)
1.2
0.0012
3T3 fibroblasts
TGGTTGCTGG (
369
)
220.8
0.2208
E15 cortex
TGGTTGCTGG (
369
)
277.1
0.2771
P1 cortex
TGGTTGCTGG (
369
)
86.4
0.0864
P1 cortex
GATTTGAGGC
(
2
)
4.5
0.0045
Hypothalamus
TGGTTGCTGG (
369
)
349.6
0.3496
Hypothalamus
GAAGCCTGTG
(
3
)
3.6
0.0036
E12.5 retina
TGGTTGCTGG (
369
)
157.7
0.1577
E12.5 retina
GAAGCCTGTG
(
3
)
1.9
0.0019
E14.5 retina
TGGTTGCTGG (
369
)
936.5
0.9365
E14.5 retina
GAAGCCTGTG
(
3
)
1.8
0.0018
E14.5 retina
GATTTGAGGC
(
2
)
1.8
0.0018
E16.5 retina
TGGTTGCTGG (
369
)
767.9
0.7679
E16.5 retina
GAAGCCTGTG
(
3
)
3.6
0.0036
E16.5 retina
GCAGCGCCCT
1.8
0.0018
E18.5 retina
TGGTTGCTGG (
369
)
252.8
0.2528
E18.5 retina
AACACCTCAC
(
3
)
1.8
0.0018
E18.5 retina
GATTTGAGGC
(
2
)
1.8
0.0018
P0.5 retina
TGGTTGCTGG (
369
)
190.4
0.1904
P0.5 retina
GAAGCCTGTG
(
3
)
2
0.002
P2.5 retina
TGGTTGCTGG (
369
)
165.4
0.1654
P2.5 retina
AACACCTCAC
(
3
)
1.8
0.0018
P2.5 retina
GCAGCGCCCT
1.8
0.0018
P2.5 retina
TAAAACTGTA (
6
)
1.8
0.0018
P4.5 retina
TGGTTGCTGG (
369
)
150.6
0.1506
P6.5 retina
TGGTTGCTGG (
369
)
156.7
0.1567
P6.5 retina
AACACCTCAC
(
3
)
1.7
0.0017
P6.5 retina
GAAGCCTGTG
(
3
)
1.7
0.0017
P10.5 crx- retina
TGGTTGCTGG (
369
)
280.5
0.2805
P10.5 crx- retina
GAAGCCTGTG
(
3
)
3.7
0.0037
P10.5 crx+ retina
TGGTTGCTGG (
369
)
101.9
0.1019
P10.5 crx+ retina
GAAGCCTGTG
(
3
)
1.9
0.0019
Adult retinal
TGGTTGCTGG (
369
)
214.8
0.2148
Adult retinal
GAAGCCTGTG
(
3
)
1.9
0.0019
Adult retinal
GATTTGAGGC
(
2
)
1.9
0.0019
ONL
TGGTTGCTGG (
369
)
398.4
0.3984
ONL
GAAGCCTGTG
(
3
)
7.7
0.0077
ONL
GATTTGAGGC
(
2
)
1.9
0.0019
