Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.256034	Cct3	chaperonin subunit 3 (gamma)	3	3 42.9 cM	12462
Gene Ontology	ATP binding | protein folding
Human Homolog	CCT3[chaperonin containing TCP1, subunit 3 (gamma)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 135 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC CACAGAACCA (4) 6.5 0.0065 P8 Cb GC GCTGGGCTCC (5) 6.5 0.0065 P8 Cb GC GATGGGGAAA (6) 1.6 0.0016 P8 Cb GC TAGCGCGCCC (35) 1.6 0.0016 P8 Cb GC TATCTCTTCT (2) 1.6 0.0016 P8 Cb GC TGTTTTTCAA (3) 1.6 0.0016 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma CACAGAACCA (4) 4.6 0.0046 Cb medulloblastoma GCACTGGATG (3) 4.6 0.0046 Cb medulloblastoma CAAGTGTGCC (3) 2.3 0.0023 Cb medulloblastoma GCAGAACAGG (5) 2.3 0.0023 Cb medulloblastoma GCTGGGCTCC (5) 2.3 0.0023 Cb medulloblastoma TTTTGTAAAA (4) 2.3 0.0023 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture CACAGAACCA (4) 4.6 0.0046 P8 GC+1d culture GATGGGGAAA (6) 3.4 0.0034 P8 GC+1d culture GCTGGGCTCC (5) 3.4 0.0034 P8 GC+1d culture TATCTCTTCT (2) 2.3 0.0023 P8 GC+1d culture TTTTGTAAAA (4) 2.3 0.0023 P8 GC+1d culture TAGCGCGCCC (35) 1.1 0.0011 P8 GC+1d culture TGTTTTTCAA (3) 1.1 0.0011 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture CACAGAACCA (4) 12.9 0.0129 P8 GC+SHH+1d culture GATGGGGAAA (6) 3.5 0.0035 P8 GC+SHH+1d culture GCTGGGCTCC (5) 3.5 0.0035 P8 GC+SHH+1d culture CAAGTGTGCC (3) 1.2 0.0012 P8 GC+SHH+1d culture GAAGCGTGGG (7) 1.2 0.0012 P8 GC+SHH+1d culture GAAGTCACCG (2) 1.2 0.0012 P8 GC+SHH+1d culture GCAGAACAGG (5) 1.2 0.0012 P8 GC+SHH+1d culture TATCTCTTCT (2) 1.2 0.0012 P8 GC+SHH+1d culture TCCACCAAGG (4) 1.2 0.0012 P8 GC+SHH+1d culture TGTTTTTCAA (3) 1.2 0.0012 P8 GC+SHH+1d culture TTTTGTAAAA (4) 1.2 0.0012 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts CACAGAACCA (4) 21 0.021 3T3 fibroblasts GCAGAACAGG (5) 3.5 0.0035 3T3 fibroblasts GCTGGGCTCC (5) 3.5 0.0035 3T3 fibroblasts GTGGCACTTG (4) 3.5 0.0035 3T3 fibroblasts TAGCGCGCCC (35) 3.5 0.0035 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 E15 cortex GAAGCGTGGG (7) 9.9 0.0099 E15 cortex TGTTTTTCAA (3) 9.9 0.0099 E15 cortex CACAGAACCA (4) 4.9 0.0049 E15 cortex GATGGGGAAA (6) 4.9 0.0049 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex CACAGAACCA (4) 9.1 0.0091 P1 cortex GCACTGGATG (3) 4.5 0.0045 P1 cortex TGGGGCAAAG (3) 4.5 0.0045 P1 cortex TGTTTTTCAA (3) 4.5 0.0045 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus CACAGAACCA (4) 1.8 0.0018 Hypothalamus GCAGAACAGG (5) 1.8 0.0018 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina CACAGAACCA (4) 26.3 0.0263 E12.5 retina AAAGAGCTGG (4) 1.9 0.0019 E12.5 retina GATGGGGAAA (6) 1.9 0.0019 E12.5 retina GCAGAACAGG (5) 1.9 0.0019 E12.5 retina GCTGGGCTCC (5) 1.9 0.0019 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina CACAGAACCA (4) 10.9 0.0109 E14.5 retina GATGGGGAAA (6) 5.5 0.0055 E14.5 retina AAAGAGCTGG (4) 3.6 0.0036 E14.5 retina ACTGGTGTGG (3) 1.8 0.0018 E14.5 retina GCTGGGCTCC (5) 1.8 0.0018 E14.5 retina TCCACCAAGG (4) 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina CACAGAACCA (4) 16.3 0.0163 E16.5 retina GATGGGGAAA (6) 7.2 0.0072 E16.5 retina AAAGAGCTGG (4) 3.6 0.0036 E16.5 retina GAAGTCACCG (2) 3.6 0.0036 E16.5 retina GCAGAACAGG (5) 3.6 0.0036 E16.5 retina ACTGGTGTGG (3) 1.8 0.0018 E16.5 retina CAAGTGTGCC (3) 1.8 0.0018 E16.5 retina TCCACCAAGG (4) 1.8 0.0018 E16.5 retina TGTTTTTCAA (3) 1.8 0.0018 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina CACAGAACCA (4) 5.5 0.0055 E18.5 retina ACTGGTGTGG (3) 1.8 0.0018 E18.5 retina CAAGTGTGCC (3) 1.8 0.0018 E18.5 retina GCAGAACAGG (5) 1.8 0.0018 E18.5 retina GCTGGGCTCC (5) 1.8 0.0018 E18.5 retina TGTTTTTCAA (3) 1.8 0.0018 E18.5 retina TTTTGTAAAA (4) 1.8 0.0018 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina CACAGAACCA (4) 7.9 0.0079 P0.5 retina GATGGGGAAA (6) 3.9 0.0039 P0.5 retina TGGGGCAAAG (3) 2 0.002 P0.5 retina TTTTGTAAAA (4) 2 0.002 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina CACAGAACCA (4) 15.8 0.0158 P2.5 retina GATGGGGAAA (6) 1.8 0.0018 P2.5 retina TGGGGCAAAG (3) 1.8 0.0018 P2.5 retina TGTTTTTCAA (3) 1.8 0.0018 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina CACAGAACCA (4) 11.9 0.0119 P4.5 retina GATGGGGAAA (6) 2 0.002 P4.5 retina GCAGAACAGG (5) 2 0.002 P4.5 retina TGGGGCAAAG (3) 2 0.002 P4.5 retina TGTTTTTCAA (3) 2 0.002 P4.5 retina TTTTGTAAAA (4) 2 0.002 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina CACAGAACCA (4) 11.7 0.0117 P6.5 retina GCAGAACAGG (5) 3.3 0.0033 P6.5 retina GCTGGGCTCC (5) 3.3 0.0033 P6.5 retina GAAGTCACCG (2) 1.7 0.0017 P6.5 retina GATGGGGAAA (6) 1.7 0.0017 P6.5 retina TATCTCTTCT (2) 1.7 0.0017 P6.5 retina TTTTGTAAAA (4) 1.7 0.0017 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina GCTGGGCTCC (5) 5.6 0.0056 P10.5 crx- retina AAAGAGCTGG (4) 1.9 0.0019 P10.5 crx- retina CACAGAACCA (4) 1.9 0.0019 P10.5 crx- retina TGGGGCAAAG (3) 1.9 0.0019 P10.5 crx- retina TTTTGTAAAA (4) 1.9 0.0019 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina CACAGAACCA (4) 15.4 0.0154 P10.5 crx+ retina GCTGGGCTCC (5) 3.8 0.0038 P10.5 crx+ retina TATCTCTTCT (2) 3.8 0.0038 P10.5 crx+ retina GAAGTCACCG (2) 1.9 0.0019 P10.5 crx+ retina TCCACCAAGG (4) 1.9 0.0019 P10.5 crx+ retina TGGGGCAAAG (3) 1.9 0.0019 P10.5 crx+ retina TTTTGTAAAA (4) 1.9 0.0019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal CACAGAACCA (4) 11.1 0.0111 Adult retinal GCTGGGCTCC (5) 7.4 0.0074 Adult retinal GCAGAACAGG (5) 1.9 0.0019 Adult retinal TATCTCTTCT (2) 1.9 0.0019 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL CACAGAACCA (4) 15.3 0.0153 ONL GCAGAACAGG (5) 3.8 0.0038 ONL GTGGCACTTG (4) 3.8 0.0038 ONL GATGGGGAAA (6) 1.9 0.0019 ONL TATCTCTTCT (2) 1.9 0.0019 ONL TGTTTTTCAA (3) 1.9 0.0019