Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.25648	Nkiras1	NFKB inhibitor interacting Ras-like protein 1	14		69721
Gene Ontology	extracellular space | GTP binding | small GTPase mediated signal transduction
Human Homolog	NKIRAS1[NFKB inhibitor interacting Ras-like 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 59 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGAAAAAAAA (69) 8.2 0.0082 P8 Cb GC TAGTTAATGT (2) 3.3 0.0033 P8 Cb GC GCATCTGTAC (3) 1.6 0.0016 Cb medulloblastoma GGAAAAAAAA (69) 41.6 0.0416 Cb medulloblastoma TAGTTAATGT (2) 11.6 0.0116 Cb medulloblastoma GCATCTGTAC (3) 2.3 0.0023 P8 GC+1d culture GGAAAAAAAA (69) 5.7 0.0057 P8 GC+1d culture TAGTTAATGT (2) 5.7 0.0057 P8 GC+1d culture GCATCTGTAC (3) 2.3 0.0023 P8 GC+1d culture GCATCTGTAG 1.1 0.0011 P8 GC+1d culture TCATTTATGT (2) 1.1 0.0011 P8 GC+SHH+1d culture TAGTTAATGT (2) 12.9 0.0129 P8 GC+SHH+1d culture GGAAAAAAAA (69) 7 0.007 P8 GC+SHH+1d culture GCATCTGTAC (3) 1.2 0.0012 P8 GC+SHH+1d culture GCATCTGTAG 1.2 0.0012 E15 cortex GGAAAAAAAA (69) 9.9 0.0099 P1 cortex AGGTTACGAT 4.5 0.0045 P1 cortex GCATCTGTAC (3) 4.5 0.0045 P1 cortex GGAAAAAAAA (69) 4.5 0.0045 P1 cortex TAGTTAATGT (2) 4.5 0.0045 Hypothalamus GGAAAAAAAA (69) 14.5 0.0145 Hypothalamus TAGTTAATGT (2) 9.1 0.0091 Hypothalamus AGGTTACGAT 5.4 0.0054 Hypothalamus TCATTTATGT (2) 1.8 0.0018 E12.5 retina TAGTTAATGT (2) 7.5 0.0075 E12.5 retina GGAAAAAAAA (69) 1.9 0.0019 E14.5 retina GGAAAAAAAA (69) 10.9 0.0109 E14.5 retina TAGTTAATGT (2) 10.9 0.0109 E14.5 retina GCATCTGTAC (3) 1.8 0.0018 E16.5 retina TAGTTAATGT (2) 10.9 0.0109 E16.5 retina TCATTTATGT (2) 3.6 0.0036 E16.5 retina GCATCTGTAC (3) 1.8 0.0018 E16.5 retina GGAAAAAAAA (69) 1.8 0.0018 E18.5 retina GGAAAAAAAA (69) 16.4 0.0164 E18.5 retina TAGTTAATGT (2) 5.5 0.0055 E18.5 retina GCATCTGTAC (3) 1.8 0.0018 P0.5 retina GGAAAAAAAA (69) 13.7 0.0137 P0.5 retina TAGTTAATGT (2) 5.9 0.0059 P2.5 retina GGAAAAAAAA (69) 7 0.007 P2.5 retina TAGTTAATGT (2) 3.5 0.0035 P2.5 retina GCATCTGTAC (3) 1.8 0.0018 P4.5 retina GGAAAAAAAA (69) 13.9 0.0139 P4.5 retina TAGTTAATGT (2) 4 0.004 P6.5 retina GGAAAAAAAA (69) 13.3 0.0133 P6.5 retina AGGTTACGAT 1.7 0.0017 P6.5 retina GCATCTGTAC (3) 1.7 0.0017 P6.5 retina TAGTTAATGT (2) 1.7 0.0017 P10.5 crx- retina TAGTTAATGT (2) 16.7 0.0167 P10.5 crx- retina GGAAAAAAAA (69) 3.7 0.0037 P10.5 crx- retina TCATTTATGT (2) 3.7 0.0037 P10.5 crx- retina GCATCTGTAC (3) 1.9 0.0019 P10.5 crx+ retina GGAAAAAAAA (69) 15.4 0.0154 P10.5 crx+ retina TAGTTAATGT (2) 9.6 0.0096 P10.5 crx+ retina GCATCTGTAC (3) 1.9 0.0019 Adult retinal GGAAAAAAAA (69) 5.6 0.0056 Adult retinal TAGTTAATGT (2) 5.6 0.0056 Adult retinal AGGTTACGAT 3.7 0.0037 ONL GGAAAAAAAA (69) 17.2 0.0172 ONL TAGTTAATGT (2) 1.9 0.0019