Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.25670
C80713
expressed sequence C80713
16
98020
Mm.25670
1700110N18Rik
RIKEN cDNA 1700110N18 gene
16
73569
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 51 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAAAAAAAAA (
204
)
45.7
0.0457
P8 Cb GC
ATGTCTTGAG
(
3
)
1.6
0.0016
Cb medulloblastoma
GAAAAAAAAA (
204
)
173.4
0.1734
Cb medulloblastoma
GGTTTAAAAA
(
6
)
4.6
0.0046
Cb medulloblastoma
GCTTCAAAAA (
5
)
2.3
0.0023
P8 GC+1d culture
GAAAAAAAAA (
204
)
41.1
0.0411
P8 GC+1d culture
GCTTCAAAAA (
5
)
1.1
0.0011
P8 GC+1d culture
GGCCGCCGCT
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
GAAAAAAAAA (
204
)
77.3
0.0773
P8 GC+SHH+1d culture
ATGTCTTGAG
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
GAAAGGGAGG (
8
)
1.2
0.0012
3T3 fibroblasts
GAAAGGGAGG (
8
)
10.5
0.0105
E15 cortex
GAAAAAAAAA (
204
)
54.4
0.0544
E15 cortex
GAAAGGGAGG (
8
)
4.9
0.0049
P1 cortex
GAAAAAAAAA (
204
)
45.5
0.0455
Hypothalamus
GAAAAAAAAA (
204
)
67
0.067
Hypothalamus
GAAAGGGAGG (
8
)
3.6
0.0036
E12.5 retina
GAAAAAAAAA (
204
)
46.9
0.0469
E12.5 retina
GAAAGGGAGG (
8
)
16.9
0.0169
E12.5 retina
GGTTTAAAAA
(
6
)
1.9
0.0019
E14.5 retina
GAAAAAAAAA (
204
)
34.6
0.0346
E14.5 retina
GAAAGGGAGG (
8
)
10.9
0.0109
E14.5 retina
GATGACTTTG
(
11
)
1.8
0.0018
E16.5 retina
GAAAAAAAAA (
204
)
23.5
0.0235
E16.5 retina
GAAAGGGAGG (
8
)
12.7
0.0127
E18.5 retina
GAAAAAAAAA (
204
)
65.5
0.0655
E18.5 retina
GCTTCAAAAA (
5
)
1.8
0.0018
P0.5 retina
GAAAAAAAAA (
204
)
35.3
0.0353
P0.5 retina
GAAAGGGAGG (
8
)
11.8
0.0118
P0.5 retina
GATGACTTTG
(
11
)
2
0.002
P0.5 retina
GGTTTAAAAA
(
6
)
2
0.002
P2.5 retina
GAAAAAAAAA (
204
)
86.2
0.0862
P2.5 retina
GAAAGGGAGG (
8
)
19.4
0.0194
P2.5 retina
GGTTTAAAAA
(
6
)
1.8
0.0018
P4.5 retina
GAAAAAAAAA (
204
)
51.5
0.0515
P4.5 retina
GAAAGGGAGG (
8
)
9.9
0.0099
P6.5 retina
GAAAAAAAAA (
204
)
40
0.04
P6.5 retina
GAAAGGGAGG (
8
)
10
0.01
P6.5 retina
GATGACTTTG
(
11
)
1.7
0.0017
P10.5 crx- retina
GAAAAAAAAA (
204
)
16.7
0.0167
P10.5 crx- retina
GAAAGGGAGG (
8
)
3.7
0.0037
P10.5 crx- retina
GGCCGCCGCT
(
4
)
1.9
0.0019
P10.5 crx+ retina
GAAAAAAAAA (
204
)
42.3
0.0423
P10.5 crx+ retina
GAAAGGGAGG (
8
)
5.8
0.0058
Adult retinal
GAAAAAAAAA (
204
)
16.7
0.0167
Adult retinal
GAAAGGGAGG (
8
)
5.6
0.0056
Adult retinal
ATGTCTTGAG
(
3
)
1.9
0.0019
ONL
GAAAAAAAAA (
204
)
24.9
0.0249
ONL
GAAAGGGAGG (
8
)
1.9
0.0019
ONL
GATGACTTTG
(
11
)
1.9
0.0019
ONL
GGCCGCCGCT
(
4
)
1.9
0.0019
