Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.257404	Cabin1	calcineurin binding protein 1	10	10 40.7 cM	104248
Gene Ontology	nucleus | protein phosphatase inhibitor activity | signal transduction
Human Homolog	CABIN1[calcineurin binding protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 72 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAATTTTATT (11) 11.4 0.0114 P8 Cb GC GAGCCTGGAG (7) 3.3 0.0033 P8 Cb GC TCCGGCTGAT 3.3 0.0033 P8 Cb GC TTGTTTTCCT (7) 1.6 0.0016 Cb medulloblastoma GAATTTTATT (11) 6.9 0.0069 Cb medulloblastoma TCCGGCTGAT 6.9 0.0069 Cb medulloblastoma TTGTTTTCCT (7) 6.9 0.0069 P8 GC+1d culture TCCGGCTGAT 5.7 0.0057 P8 GC+1d culture TTGTTTTCCT (7) 2.3 0.0023 P8 GC+1d culture GAATTTTATT (11) 1.1 0.0011 P8 GC+1d culture GGCTTGGAAA (7) 1.1 0.0011 P8 GC+SHH+1d culture TCCGGCTGAT 7 0.007 P8 GC+SHH+1d culture GAATTTTATT (11) 4.7 0.0047 P8 GC+SHH+1d culture TTGTTTTCCT (7) 3.5 0.0035 P8 GC+SHH+1d culture GAGCCTGGAG (7) 2.3 0.0023 P8 GC+SHH+1d culture GGCTTGGAAA (7) 1.2 0.0012 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts TCCGGCTGAT 10.5 0.0105 3T3 fibroblasts GGCCCCAGGG (7) 3.5 0.0035 E15 cortex GAATTTTATT (11) 14.8 0.0148 E15 cortex TCCGGCTGAT 14.8 0.0148 E15 cortex GTCATAGCTG (590) 4.9 0.0049 Hypothalamus TTGTTTTCCT (7) 12.7 0.0127 Hypothalamus GAATTTTATT (11) 3.6 0.0036 Hypothalamus TCCGGCTGAT 1.8 0.0018 E12.5 retina TCCGGCTGAT 3.8 0.0038 E12.5 retina GAATTTTATT (11) 1.9 0.0019 E14.5 retina GAATTTTATT (11) 12.8 0.0128 E14.5 retina TTGTTTTCCT (7) 5.5 0.0055 E14.5 retina GGCTTGGAAA (7) 3.6 0.0036 E14.5 retina CTGGAGACAG (4) 1.8 0.0018 E14.5 retina TCCGGCTGAT 1.8 0.0018 E16.5 retina GAATTTTATT (11) 7.2 0.0072 E16.5 retina TTGTTTTCCT (7) 5.4 0.0054 E16.5 retina CTGGAGACAG (4) 3.6 0.0036 E16.5 retina TCCGGCTGAT 3.6 0.0036 E16.5 retina AAAATAACAT 1.8 0.0018 E16.5 retina GGCCCCAGGG (7) 1.8 0.0018 E18.5 retina GAATTTTATT (11) 9.1 0.0091 P0.5 retina GAATTTTATT (11) 3.9 0.0039 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina AAAATAACAT 2 0.002 P0.5 retina TCCGGCTGAT 2 0.002 P0.5 retina TTGTTTTCCT (7) 2 0.002 P2.5 retina TCCGGCTGAT 5.3 0.0053 P2.5 retina GAATTTTATT (11) 3.5 0.0035 P2.5 retina TTGTTTTCCT (7) 3.5 0.0035 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina TCCGGCTGAT 11.9 0.0119 P4.5 retina GAATTTTATT (11) 4 0.004 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina TTGTTTTCCT (7) 2 0.002 P6.5 retina TCCGGCTGAT 11.7 0.0117 P6.5 retina TTGTTTTCCT (7) 5 0.005 P6.5 retina GAATTTTATT (11) 3.3 0.0033 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P10.5 crx- retina GAATTTTATT (11) 3.7 0.0037 P10.5 crx- retina TTGTTTTCCT (7) 3.7 0.0037 P10.5 crx- retina TCCGGCTGAT 1.9 0.0019 P10.5 crx+ retina GAATTTTATT (11) 3.8 0.0038 P10.5 crx+ retina TCCGGCTGAT 3.8 0.0038 P10.5 crx+ retina TTGTTTTCCT (7) 3.8 0.0038 P10.5 crx+ retina AAAATAACAT 1.9 0.0019 Adult retinal TTGTTTTCCT (7) 9.3 0.0093 Adult retinal TCCGGCTGAT 3.7 0.0037 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL GTCATAGCTG (590) 5.7 0.0057 ONL TTGTTTTCCT (7) 5.7 0.0057 ONL CTGGAGACAG (4) 1.9 0.0019 ONL GAATTTTATT (11) 1.9 0.0019 ONL GGCCCCAGGG (7) 1.9 0.0019 ONL GGCTTGGAAA (7) 1.9 0.0019