Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.257442	D8Ertd54e	DNA segment, Chr 8, ERATO Doi 54, expressed	8	8 55.0 cM	52071
Mm.257442	Gabarapl2	gamma-aminobutyric acid (GABA-A) receptor-associated protein-like 2	8		93739
Gene Ontology	actin binding | ATP binding | cytoskeleton | Golgi apparatus | Golgi apparatus | Golgi membrane | intracellular protein transport | intra-Golgi transport | protein binding | protein binding | protein transport | protein transporter activity | transport
Human Homolog	GABARAPL2[GABA(A) receptor-associated protein-like 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 67 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTGGACTGAG (7) 34.3 0.0343 P8 Cb GC AGGACAGTGC (5) 3.3 0.0033 P8 Cb GC CACACACATA (15) 1.6 0.0016 P8 Cb GC GCTATTTGCT (4) 1.6 0.0016 Cb medulloblastoma TTGGACTGAG (7) 97.1 0.0971 Cb medulloblastoma AGGACAGTGC (5) 16.2 0.0162 Cb medulloblastoma ATTTGCAGTT (2) 2.3 0.0023 Cb medulloblastoma CACACACATA (15) 2.3 0.0023 Cb medulloblastoma CACCTGTTTT (4) 2.3 0.0023 P8 GC+1d culture TTGGACTGAG (7) 33.1 0.0331 P8 GC+1d culture TGGATCATCA (9) 2.3 0.0023 P8 GC+SHH+1d culture TTGGACTGAG (7) 31.6 0.0316 P8 GC+SHH+1d culture AGGACAGTGC (5) 4.7 0.0047 P8 GC+SHH+1d culture ATTTGCAGTT (2) 2.3 0.0023 P8 GC+SHH+1d culture GCTATTTGCT (4) 1.2 0.0012 E15 cortex TTGGACTGAG (7) 24.7 0.0247 P1 cortex TTGGACTGAG (7) 18.2 0.0182 Hypothalamus TTGGACTGAG (7) 83.3 0.0833 Hypothalamus AGGACAGTGC (5) 9.1 0.0091 Hypothalamus ATTTGCAGTT (2) 5.4 0.0054 Hypothalamus TGGATCATCA (9) 5.4 0.0054 Hypothalamus AACTGAGCCA (3) 3.6 0.0036 Hypothalamus CACACACATA (15) 1.8 0.0018 Hypothalamus CACCTGTTTT (4) 1.8 0.0018 Hypothalamus GCTATTTGCT (4) 1.8 0.0018 E12.5 retina TTGGACTGAG (7) 18.8 0.0188 E12.5 retina AGGACAGTGC (5) 5.6 0.0056 E12.5 retina CACACACATA (15) 1.9 0.0019 E14.5 retina TTGGACTGAG (7) 43.7 0.0437 E14.5 retina GCTATTTGCT (4) 9.1 0.0091 E14.5 retina AGGACAGTGC (5) 5.5 0.0055 E16.5 retina TTGGACTGAG (7) 32.6 0.0326 E16.5 retina AGGACAGTGC (5) 10.9 0.0109 E16.5 retina ATTTGCAGTT (2) 5.4 0.0054 E16.5 retina GCTATTTGCT (4) 5.4 0.0054 E16.5 retina TGGATCATCA (9) 1.8 0.0018 E18.5 retina TTGGACTGAG (7) 50.9 0.0509 E18.5 retina AGGACAGTGC (5) 3.6 0.0036 E18.5 retina CACACACATA (15) 1.8 0.0018 P0.5 retina TTGGACTGAG (7) 19.6 0.0196 P0.5 retina TGGATCATCA (9) 5.9 0.0059 P0.5 retina AGGACAGTGC (5) 2 0.002 P2.5 retina TTGGACTGAG (7) 26.4 0.0264 P4.5 retina TTGGACTGAG (7) 35.7 0.0357 P4.5 retina AGGACAGTGC (5) 4 0.004 P4.5 retina AACTGAGCCA (3) 2 0.002 P4.5 retina GCTATTTGCT (4) 2 0.002 P4.5 retina TGGATCATCA (9) 2 0.002 P6.5 retina TTGGACTGAG (7) 25 0.025 P6.5 retina AGGACAGTGC (5) 8.3 0.0083 P6.5 retina CACACACATA (15) 1.7 0.0017 P6.5 retina TGGATCATCA (9) 1.7 0.0017 P10.5 crx- retina TTGGACTGAG (7) 44.6 0.0446 P10.5 crx- retina GCTATTTGCT (4) 11.1 0.0111 P10.5 crx- retina AGGACAGTGC (5) 5.6 0.0056 P10.5 crx+ retina TTGGACTGAG (7) 59.6 0.0596 P10.5 crx+ retina AGGACAGTGC (5) 1.9 0.0019 P10.5 crx+ retina GCTATTTGCT (4) 1.9 0.0019 Adult retinal TTGGACTGAG (7) 24.1 0.0241 Adult retinal CTGGGCTAGG (5) 9.3 0.0093 Adult retinal CACACACATA (15) 3.7 0.0037 Adult retinal AGGACAGTGC (5) 1.9 0.0019 Adult retinal CACCTGTTTT (4) 1.9 0.0019 ONL TTGGACTGAG (7) 7.7 0.0077 ONL AGGACAGTGC (5) 5.7 0.0057 ONL CACACACATA (15) 5.7 0.0057 ONL CTGGGCTAGG (5) 1.9 0.0019