Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.257474	D2Ertd612e	DNA segment, Chr 2, ERATO Doi 612, expressed	2	2 31.0 cM	51922
Mm.257474	Fnbp3	formin binding protein 3	2		56194
Gene Ontology	mRNA processing | nuclear mRNA splicing, via spliceosome | protein binding
Human Homolog	FNBP3[formin binding protein 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 122 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC ATAAAAAAAA (33) 11.4 0.0114 P8 Cb GC TAAATCCAAA (3) 9.8 0.0098 P8 Cb GC TGGAGGAGCT (4) 8.2 0.0082 P8 Cb GC CTTTTAATCC (33) 3.3 0.0033 P8 Cb GC GTACACATTC (2) 3.3 0.0033 P8 Cb GC ATTTTTATTC (3) 1.6 0.0016 P8 Cb GC TATATGTGTG (3) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma ATAAAAAAAA (33) 25.4 0.0254 Cb medulloblastoma TAAATCCAAA (3) 4.6 0.0046 Cb medulloblastoma TAGATGTTGT (4) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture TGGAGGAGCT (4) 10.3 0.0103 P8 GC+1d culture TAAATCCAAA (3) 6.8 0.0068 P8 GC+1d culture ATAAAAAAAA (33) 5.7 0.0057 P8 GC+1d culture CTTTTAATCC (33) 1.1 0.0011 P8 GC+1d culture TAGATGTTGT (4) 1.1 0.0011 P8 GC+1d culture TCCATTTTCT (5) 1.1 0.0011 P8 GC+1d culture TCTTGGGGCT (2) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture ATAAAAAAAA (33) 21.1 0.0211 P8 GC+SHH+1d culture TGGAGGAGCT (4) 5.9 0.0059 P8 GC+SHH+1d culture TAAATCCAAA (3) 4.7 0.0047 P8 GC+SHH+1d culture ATAGCTGCAG (3) 1.2 0.0012 P8 GC+SHH+1d culture CTTTTAATCC (33) 1.2 0.0012 P8 GC+SHH+1d culture TAAATGTTTA (2) 1.2 0.0012 P8 GC+SHH+1d culture TAGATGTTGT (4) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts GCTGCTGCAG (8) 3.5 0.0035 3T3 fibroblasts GGAGCAGGCT (3) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex TGGAGGAGCT (4) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex CCAAAAGCTT (3) 9.1 0.0091 P1 cortex CTTTTAATCC (33) 4.5 0.0045 P1 cortex GTACACATTC (2) 4.5 0.0045 P1 cortex TAAATCCAAA (3) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus ATAAAAAAAA (33) 7.2 0.0072 Hypothalamus TAAATCCAAA (3) 7.2 0.0072 Hypothalamus TGGAGGAGCT (4) 3.6 0.0036 Hypothalamus TAAATGTTTA (2) 1.8 0.0018 Hypothalamus TATATGTGTG (3) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina ATAAAAAAAA (33) 11.3 0.0113 E12.5 retina GGAGCAGGCT (3) 3.8 0.0038 E12.5 retina ATAGCTGCAG (3) 1.9 0.0019 E12.5 retina CTTTTAATCC (33) 1.9 0.0019 E12.5 retina TAAATCCAAA (3) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina ATAAAAAAAA (33) 16.4 0.0164 E14.5 retina ATAGCTGCAG (3) 1.8 0.0018 E14.5 retina CTTTTAATCC (33) 1.8 0.0018 E14.5 retina GCTGCTGCAG (8) 1.8 0.0018 E14.5 retina GTACACATTC (2) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina CTTTTAATCC (33) 7.2 0.0072 E16.5 retina ATAAAAAAAA (33) 5.4 0.0054 E16.5 retina GTACACATTC (2) 1.8 0.0018 E16.5 retina TAAATCCAAA (3) 1.8 0.0018 E16.5 retina TGGAGGAGCT (4) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina ATAAAAAAAA (33) 30.9 0.0309 E18.5 retina TAAATCCAAA (3) 3.6 0.0036 E18.5 retina GTACACATTC (2) 1.8 0.0018 E18.5 retina TCCATTTTCT (5) 1.8 0.0018 E18.5 retina TGGAGGAGCT (4) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina TGGAGGAGCT (4) 7.9 0.0079 P0.5 retina TAAATCCAAA (3) 3.9 0.0039 P0.5 retina ATAAAAAAAA (33) 2 0.002 P0.5 retina TCTTGGGGCT (2) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina TAAATCCAAA (3) 29.9 0.0299 P2.5 retina ATAAAAAAAA (33) 14.1 0.0141 P2.5 retina ATAGCTGCAG (3) 7 0.007 P2.5 retina GTACACATTC (2) 3.5 0.0035 P2.5 retina TGGAGGAGCT (4) 3.5 0.0035 P2.5 retina CCAAAAGCTT (3) 1.8 0.0018 P2.5 retina TAAATGTTTA (2) 1.8 0.0018 P2.5 retina TCTTGGGGCT (2) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina ATAAAAAAAA (33) 21.8 0.0218 P4.5 retina ATAGCTGCAG (3) 5.9 0.0059 P4.5 retina ATTTTTATTC (3) 4 0.004 P4.5 retina TAAATCCAAA (3) 4 0.004 P4.5 retina TGGAGGAGCT (4) 4 0.004 P4.5 retina TATATGTGTG (3) 2 0.002 P4.5 retina TCCATTTTCT (5) 2 0.002 P4.5 retina TCTTGGGGCT (2) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina ATAAAAAAAA (33) 10 0.01 P6.5 retina TAAATCCAAA (3) 8.3 0.0083 P6.5 retina ATAGCTGCAG (3) 6.7 0.0067 P6.5 retina TGGAGGAGCT (4) 6.7 0.0067 P6.5 retina GTACACATTC (2) 1.7 0.0017 P6.5 retina TCCATTTTCT (5) 1.7 0.0017 P6.5 retina TCTTGGGGCT (2) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina ATAAAAAAAA (33) 5.6 0.0056 P10.5 crx- retina TGGAGGAGCT (4) 5.6 0.0056 P10.5 crx- retina CTTTTAATCC (33) 3.7 0.0037 P10.5 crx- retina ATAGCTGCAG (3) 1.9 0.0019 P10.5 crx- retina TAAATCCAAA (3) 1.9 0.0019 P10.5 crx- retina TAGATGTTGT (4) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina ATAAAAAAAA (33) 3.8 0.0038 P10.5 crx+ retina TAAATCCAAA (3) 3.8 0.0038 P10.5 crx+ retina GGAGCAGGCT (3) 1.9 0.0019 P10.5 crx+ retina TGGAGGAGCT (4) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal TAAATCCAAA (3) 7.4 0.0074 Adult retinal TGGAGGAGCT (4) 5.6 0.0056 Adult retinal CTTTTAATCC (33) 3.7 0.0037 Adult retinal GCTGCTGCAG (8) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL CTTTTAATCC (33) 5.7 0.0057 ONL ATAGCTGCAG (3) 3.8 0.0038 ONL TAAATGTTTA (2) 3.8 0.0038 ONL ATAAAAAAAA (33) 1.9 0.0019 ONL GCTGCTGCAG (8) 1.9 0.0019