Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.25779	Sf3a3	splicing factor 3a, subunit 3	4		75062
Gene Ontology	mRNA processing | nuclear mRNA splicing, via spliceosome | nucleic acid binding | nucleus | spliceosome complex | zinc ion binding
Human Homolog	SF3A3[splicing factor 3a, subunit 3, 60kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 43 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGGTCAGTG (4) 6.5 0.0065 P8 Cb GC ACTGTTACCT (4) 1.6 0.0016 P8 Cb GC AGGTGTTTGG 1.6 0.0016 P8 Cb GC CCTCCCGCCC (3) 1.6 0.0016 Cb medulloblastoma AAGAATATGA (4) 2.3 0.0023 Cb medulloblastoma ACTGTTACCT (4) 2.3 0.0023 Cb medulloblastoma AGGTGTTTGG 2.3 0.0023 P8 GC+1d culture AGGTGTTTGG 4.6 0.0046 P8 GC+1d culture ACTGTTACCT (4) 1.1 0.0011 P8 GC+SHH+1d culture ACTGTTACCT (4) 4.7 0.0047 P8 GC+SHH+1d culture AGGTGTTTGG 2.3 0.0023 P8 GC+SHH+1d culture GCTTCCCTGG (6) 1.2 0.0012 3T3 fibroblasts AGGTGTTTGG 3.5 0.0035 3T3 fibroblasts GCTTCCCTGG (6) 3.5 0.0035 E15 cortex AAGAATATGA (4) 4.9 0.0049 Hypothalamus AGGTGTTTGG 1.8 0.0018 E12.5 retina ACTGTTACCT (4) 11.3 0.0113 E12.5 retina AGGTGTTTGG 3.8 0.0038 E12.5 retina AAGAATATGA (4) 1.9 0.0019 E14.5 retina AGGTGTTTGG 7.3 0.0073 E16.5 retina ACTGTTACCT (4) 5.4 0.0054 E16.5 retina AGGTGTTTGG 1.8 0.0018 E18.5 retina ACGCCACTCC 1.8 0.0018 E18.5 retina ACTGTTACCT (4) 1.8 0.0018 E18.5 retina AGGTGTTTGG 1.8 0.0018 E18.5 retina CCTCCCGCCC (3) 1.8 0.0018 P0.5 retina AGGTGTTTGG 13.7 0.0137 P0.5 retina CCTCCCGCCC (3) 2 0.002 P2.5 retina ACTGTTACCT (4) 3.5 0.0035 P2.5 retina AGGTGTTTGG 1.8 0.0018 P4.5 retina ACTGTTACCT (4) 4 0.004 P4.5 retina AGGTGTTTGG 2 0.002 P6.5 retina CCTCCCGCCC (3) 5 0.005 P6.5 retina ACGCCACTCC 3.3 0.0033 P6.5 retina ACTGTTACCT (4) 3.3 0.0033 P6.5 retina AAGAATATGA (4) 1.7 0.0017 P10.5 crx- retina AGGTGTTTGG 7.4 0.0074 P10.5 crx- retina ACTGTTACCT (4) 5.6 0.0056 P10.5 crx+ retina AGGTGTTTGG 3.8 0.0038 P10.5 crx+ retina ACTGTTACCT (4) 1.9 0.0019 P10.5 crx+ retina GCTTCCCTGG (6) 1.9 0.0019 Adult retinal AGGTGTTTGG 1.9 0.0019 ONL AAGAATATGA (4) 1.9 0.0019