Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.25785
Ldb2
LIM domain binding 2
5
5 B3
16826
Mm.25785
X98549
expressed sequence X98549
5
97285
Mm.25785
AI035351
expressed sequence AI035351
5
100565
Mm.25785
E030026E10Rik
RIKEN cDNA E030026E10 gene
5
320810
Mm.25785
8030487O14Rik
RIKEN cDNA 8030487O14 gene
5
77548
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 54 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGAATAAAAA (
7
)
6.5
0.0065
P8 Cb GC
AAATATTCCA (
6
)
1.6
0.0016
P8 Cb GC
AATGTTTGAA (
10
)
1.6
0.0016
Cb medulloblastoma
AGAATAAAAA (
7
)
4.6
0.0046
Cb medulloblastoma
TAAAGACACA
(
9
)
2.3
0.0023
P8 GC+1d culture
AAATATTCCA (
6
)
3.4
0.0034
P8 GC+1d culture
AGAATAAAAA (
7
)
3.4
0.0034
P8 GC+SHH+1d culture
AAATATTCCA (
6
)
2.3
0.0023
P8 GC+SHH+1d culture
AGAATAAAAA (
7
)
1.2
0.0012
P8 GC+SHH+1d culture
CACACAGAGA
(
7
)
1.2
0.0012
E15 cortex
CTGTGCAAAC
(
5
)
9.9
0.0099
E15 cortex
TAAAGACACA
(
9
)
4.9
0.0049
P1 cortex
AAATATTCCA (
6
)
13.6
0.0136
P1 cortex
TAAAGACACA
(
9
)
13.6
0.0136
P1 cortex
AATGTTTGAA (
10
)
9.1
0.0091
P1 cortex
CTGTGCAAAC
(
5
)
4.5
0.0045
P1 cortex
GAAACCAATG (
8
)
4.5
0.0045
Hypothalamus
AGAATAAAAA (
7
)
5.4
0.0054
Hypothalamus
AAATATTCCA (
6
)
3.6
0.0036
Hypothalamus
TATAGAGGAA
(
6
)
1.8
0.0018
E12.5 retina
TAAAGACACA
(
9
)
5.6
0.0056
E12.5 retina
CACACAGAGA
(
7
)
1.9
0.0019
E14.5 retina
TAAAGACACA
(
9
)
3.6
0.0036
E16.5 retina
AATGTTTGAA (
10
)
1.8
0.0018
E16.5 retina
TAAAGACACA
(
9
)
1.8
0.0018
E18.5 retina
TAAAGACACA
(
9
)
3.6
0.0036
E18.5 retina
AAATATTCCA (
6
)
1.8
0.0018
E18.5 retina
AGAATAAAAA (
7
)
1.8
0.0018
P0.5 retina
AAATATTCCA (
6
)
3.9
0.0039
P0.5 retina
TAAAGACACA
(
9
)
2
0.002
P2.5 retina
AGAATAAAAA (
7
)
3.5
0.0035
P2.5 retina
TAAAGACACA
(
9
)
3.5
0.0035
P2.5 retina
AAATATTCCA (
6
)
1.8
0.0018
P2.5 retina
CACACAGAGA
(
7
)
1.8
0.0018
P4.5 retina
AGAATAAAAA (
7
)
4
0.004
P4.5 retina
AAATATTCCA (
6
)
2
0.002
P4.5 retina
GAAACCAATG (
8
)
2
0.002
P4.5 retina
TAAAGACACA
(
9
)
2
0.002
P6.5 retina
AAATATTCCA (
6
)
8.3
0.0083
P6.5 retina
AGAATAAAAA (
7
)
1.7
0.0017
P10.5 crx- retina
AGAATAAAAA (
7
)
3.7
0.0037
P10.5 crx- retina
AAATATTCCA (
6
)
1.9
0.0019
P10.5 crx- retina
CTGTGCAAAC
(
5
)
1.9
0.0019
P10.5 crx+ retina
AAATATTCCA (
6
)
7.7
0.0077
P10.5 crx+ retina
AGAATAAAAA (
7
)
3.8
0.0038
P10.5 crx+ retina
TAAAGACACA
(
9
)
3.8
0.0038
P10.5 crx+ retina
TATAGAGGAA
(
6
)
3.8
0.0038
P10.5 crx+ retina
GAAACCAATG (
8
)
1.9
0.0019
Adult retinal
CTGTGCAAAC
(
5
)
3.7
0.0037
Adult retinal
AATGTTTGAA (
10
)
1.9
0.0019
Adult retinal
AGAATAAAAA (
7
)
1.9
0.0019
ONL
AGAATAAAAA (
7
)
5.7
0.0057
ONL
AAATATTCCA (
6
)
3.8
0.0038
ONL
AATGTTTGAA (
10
)
1.9
0.0019
