Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.257989	Snrk	SNF related kinase	9	9 F4 (11 22.0 cM)	20623
Gene Ontology	ATP binding | kinase activity | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | transferase activity
Human Homolog	SNRK[SNF-1 related kinase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 43 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGCCTGAACA (3) 1.6 0.0016 Cb medulloblastoma AGCCTGAACA (3) 9.2 0.0092 Cb medulloblastoma CTCTGAGGCA (6) 4.6 0.0046 Cb medulloblastoma TGTTGTGTGT (4) 2.3 0.0023 P8 GC+1d culture AGCCTGAACA (3) 1.1 0.0011 P8 GC+SHH+1d culture AGCCTGAACA (3) 4.7 0.0047 P8 GC+SHH+1d culture CGCTGGATGA (6) 4.7 0.0047 3T3 fibroblasts AGCCTGAACA (3) 3.5 0.0035 3T3 fibroblasts CGCTGGATGA (6) 3.5 0.0035 E15 cortex CGCTGGATGA (6) 4.9 0.0049 P1 cortex CTCTGAGGCA (6) 4.5 0.0045 Hypothalamus AGCCTGAACA (3) 9.1 0.0091 Hypothalamus CGCTGGATGA (6) 3.6 0.0036 E14.5 retina CGCTGGATGA (6) 3.6 0.0036 E14.5 retina GCAGCATTTG (5) 1.8 0.0018 E16.5 retina CGCTGGATGA (6) 3.6 0.0036 E16.5 retina GCAGCATTTG (5) 3.6 0.0036 E16.5 retina CTCTGAGGCA (6) 1.8 0.0018 E18.5 retina AGCCTGAACA (3) 1.8 0.0018 E18.5 retina CTCTGAGGCA (6) 1.8 0.0018 E18.5 retina GCAGCATTTG (5) 1.8 0.0018 P0.5 retina CTCTGAGGCA (6) 3.9 0.0039 P0.5 retina AGCCTGAACA (3) 2 0.002 P0.5 retina CGCTGGATGA (6) 2 0.002 P0.5 retina TGTTGTGTGT (4) 2 0.002 P2.5 retina AGCCTGAACA (3) 5.3 0.0053 P2.5 retina CGCTGGATGA (6) 3.5 0.0035 P2.5 retina CTCTGAGGCA (6) 1.8 0.0018 P6.5 retina AGCCTGAACA (3) 6.7 0.0067 P6.5 retina CTCTGAGGCA (6) 1.7 0.0017 P6.5 retina TGTTGTGTGT (4) 1.7 0.0017 P10.5 crx- retina AGCCTGAACA (3) 14.9 0.0149 P10.5 crx- retina CTCTGAGGCA (6) 7.4 0.0074 P10.5 crx- retina CGCTGGATGA (6) 3.7 0.0037 P10.5 crx- retina GCAGCATTTG (5) 3.7 0.0037 P10.5 crx+ retina AGCCTGAACA (3) 9.6 0.0096 P10.5 crx+ retina CGCTGGATGA (6) 3.8 0.0038 P10.5 crx+ retina CTCTGAGGCA (6) 1.9 0.0019 Adult retinal AGCCTGAACA (3) 11.1 0.0111 Adult retinal CTCTGAGGCA (6) 5.6 0.0056 Adult retinal CGCTGGATGA (6) 1.9 0.0019 Adult retinal TGTTGTGTGT (4) 1.9 0.0019 ONL AGCCTGAACA (3) 7.7 0.0077