Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.258431	BC020402	cDNA sequence BC020402			407824
Mm.258431	A630066F11Rik	RIKEN cDNA A630066F11 gene	10		320642
Mm.258431	Pcmt1	protein-L-isoaspartate (D-aspartate) O-methyltransferase 1	10	10 7.0 cM	18537
Gene Ontology	methyltransferase activity | protein amino acid methylation | protein modification | protein-L-isoaspartate (D-aspartate) O-methyltransferase activity | protein-L-isoaspartate (D-aspartate) O-methyltransferase activity | S-adenosylmethionine-dependent methyltransferase activity | transferase activity
Human Homolog	PCMT1[protein-L-isoaspartate (D-aspartate) O-methyltransferase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 64 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAGCCTGCT (7) 1.6 0.0016 P8 Cb GC CCCACATTTC (3) 1.6 0.0016 P8 Cb GC TCGTAGATAC (3) 1.6 0.0016 P8 Cb GC TGGGGAGCTG (3) 1.6 0.0016 P8 Cb GC TTATAGCTGC (3) 1.6 0.0016 Cb medulloblastoma GTCATTTGAA (3) 6.9 0.0069 Cb medulloblastoma TCGTAGATAC (3) 2.3 0.0023 Cb medulloblastoma TGGGGAGCTG (3) 2.3 0.0023 Cb medulloblastoma TTATAGCTGC (3) 2.3 0.0023 P8 GC+1d culture TTATAGCTGC (3) 4.6 0.0046 P8 GC+1d culture CCCACATTTC (3) 3.4 0.0034 P8 GC+1d culture TCGTAGATAC (3) 3.4 0.0034 P8 GC+1d culture GTCATTTGAA (3) 2.3 0.0023 P8 GC+SHH+1d culture TTATAGCTGC (3) 4.7 0.0047 P8 GC+SHH+1d culture GTCATTTGAA (3) 3.5 0.0035 P8 GC+SHH+1d culture TCGTAGATAC (3) 2.3 0.0023 P8 GC+SHH+1d culture CCCACATTTC (3) 1.2 0.0012 E15 cortex CCCACATTTC (3) 4.9 0.0049 E15 cortex TGGGAGCTGG (4) 4.9 0.0049 P1 cortex TTATAGCTGC (3) 4.5 0.0045 Hypothalamus GTCATTTGAA (3) 7.2 0.0072 Hypothalamus TCGTAGATAC (3) 7.2 0.0072 Hypothalamus TTATAGCTGC (3) 7.2 0.0072 Hypothalamus CCCACATTTC (3) 3.6 0.0036 E12.5 retina TTATAGCTGC (3) 3.8 0.0038 E14.5 retina GTCATTTGAA (3) 3.6 0.0036 E14.5 retina CAAGCCTGCT (7) 1.8 0.0018 E14.5 retina CCCACATTTC (3) 1.8 0.0018 E14.5 retina TGGGAGCTGG (4) 1.8 0.0018 E14.5 retina TTATAGCTGC (3) 1.8 0.0018 E16.5 retina CCCACATTTC (3) 1.8 0.0018 E18.5 retina TTATAGCTGC (3) 10.9 0.0109 E18.5 retina GTCATTTGAA (3) 7.3 0.0073 E18.5 retina CAAGCCTGCT (7) 1.8 0.0018 E18.5 retina TCGTAGATAC (3) 1.8 0.0018 P0.5 retina TTATAGCTGC (3) 7.9 0.0079 P0.5 retina CCCACATTTC (3) 2 0.002 P0.5 retina GTCATTTGAA (3) 2 0.002 P0.5 retina TCGTAGATAC (3) 2 0.002 P0.5 retina TGGGAGCTGG (4) 2 0.002 P2.5 retina CCCACATTTC (3) 5.3 0.0053 P2.5 retina GTCATTTGAA (3) 1.8 0.0018 P2.5 retina TCGTAGATAC (3) 1.8 0.0018 P2.5 retina TTATAGCTGC (3) 1.8 0.0018 P4.5 retina TTATAGCTGC (3) 7.9 0.0079 P4.5 retina CCCACATTTC (3) 2 0.002 P4.5 retina GTCATTTGAA (3) 2 0.002 P6.5 retina TTATAGCTGC (3) 5 0.005 P6.5 retina CCCACATTTC (3) 3.3 0.0033 P6.5 retina TGGGGAGCTG (3) 1.7 0.0017 P10.5 crx- retina CCCACATTTC (3) 3.7 0.0037 P10.5 crx- retina TGGGGAGCTG (3) 1.9 0.0019 P10.5 crx- retina TTATAGCTGC (3) 1.9 0.0019 P10.5 crx+ retina GTCATTTGAA (3) 5.8 0.0058 P10.5 crx+ retina CCCACATTTC (3) 3.8 0.0038 P10.5 crx+ retina TTATAGCTGC (3) 3.8 0.0038 P10.5 crx+ retina TCGTAGATAC (3) 1.9 0.0019 Adult retinal CCCACATTTC (3) 5.6 0.0056 Adult retinal TCGTAGATAC (3) 3.7 0.0037 Adult retinal TTATAGCTGC (3) 3.7 0.0037 Adult retinal TGGGGAGCTG (3) 1.9 0.0019 ONL CCCACATTTC (3) 3.8 0.0038 ONL GTCATTTGAA (3) 1.9 0.0019 ONL TGGGAGCTGG (4) 1.9 0.0019