Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.258589
Map3k7
mitogen activated protein kinase kinase kinase 7
4
26409
Mm.258589
9530004M16Rik
RIKEN cDNA 9530004M16 gene
4
77406
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 66 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
AAAAAATAAA (
17
)
11.4
0.0114
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
AAAAAATAAA (
17
)
6.9
0.0069
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
AAAAAATAAA (
17
)
8
0.008
P8 GC+1d culture
TCAGCCCCAC
(
4
)
8
0.008
P8 GC+1d culture
CTTTTAAGAG
(
4
)
2.3
0.0023
P8 GC+1d culture
GAGGAATGTG (
5
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
TCAGCCCCAC
(
4
)
3.5
0.0035
P8 GC+SHH+1d culture
AAAAAATAAA (
17
)
2.3
0.0023
P8 GC+SHH+1d culture
CTTTTAAGAG
(
4
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
TCAGCCCCAC
(
4
)
3.5
0.0035
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
TCAGCCCCAC
(
4
)
4.9
0.0049
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
AAAAAATAAA (
17
)
9.1
0.0091
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
AAAAAATAAA (
17
)
9.4
0.0094
E12.5 retina
TCAGCCCCAC
(
4
)
7.5
0.0075
E12.5 retina
CTTTTAAGAG
(
4
)
1.9
0.0019
E12.5 retina
GAGGAATGTG (
5
)
1.9
0.0019
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
AAAAAATAAA (
17
)
5.5
0.0055
E14.5 retina
CTTTTAAGAG
(
4
)
3.6
0.0036
E14.5 retina
TCAGCCCCAC
(
4
)
3.6
0.0036
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
AAAAAATAAA (
17
)
9.1
0.0091
E16.5 retina
TCAGCCCCAC
(
4
)
3.6
0.0036
E16.5 retina
CTTTTAAGAG
(
4
)
1.8
0.0018
E16.5 retina
GAGGAATGTG (
5
)
1.8
0.0018
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
AAAAAATAAA (
17
)
16.4
0.0164
E18.5 retina
CTCTAGGTTG
(
2
)
1.8
0.0018
E18.5 retina
TCAGCCCCAC
(
4
)
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
TCAGCCCCAC
(
4
)
9.8
0.0098
P0.5 retina
AAAAAATAAA (
17
)
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
AAAAAATAAA (
17
)
12.3
0.0123
P2.5 retina
TCAGCCCCAC
(
4
)
12.3
0.0123
P2.5 retina
GAGGAATGTG (
5
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
AAAAAATAAA (
17
)
11.9
0.0119
P4.5 retina
TCAGCCCCAC
(
4
)
4
0.004
P4.5 retina
CTCTAGGTTG
(
2
)
2
0.002
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
AAAAAATAAA (
17
)
10
0.01
P6.5 retina
TCAGCCCCAC
(
4
)
5
0.005
P6.5 retina
CTCTAGGTTG
(
2
)
1.7
0.0017
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
AAAAAATAAA (
17
)
5.6
0.0056
P10.5 crx- retina
GAGGAATGTG (
5
)
3.7
0.0037
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
AAAAAATAAA (
17
)
1.9
0.0019
P10.5 crx+ retina
CTTTTAAGAG
(
4
)
1.9
0.0019
P10.5 crx+ retina
TCAGCCCCAC
(
4
)
1.9
0.0019
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
TCAGCCCCAC
(
4
)
3.7
0.0037
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
AAAAAATAAA (
17
)
23
0.023
ONL
TCAGCCCCAC
(
4
)
5.7
0.0057
ONL
GAGGAATGTG (
5
)
1.9
0.0019
