Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.25860	Map4k2	mitogen activated protein kinase kinase kinase kinase 2	19		26412
Gene Ontology	ATP binding | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | small GTPase regulatory/interacting protein activity | transferase activity
Human Homolog	MAP4K2[mitogen-activated protein kinase kinase kinase kinase 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 65 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGAAAAAAAA (81) 27.7 0.0277 P8 Cb GC TATTTAAGAG (2) 4.9 0.0049 P8 Cb GC GAAACATTCT (7) 1.6 0.0016 P8 Cb GC TAACTCTTGC (4) 1.6 0.0016 P8 Cb GC TTTTGTCCCT (4) 1.6 0.0016 Cb medulloblastoma TGAAAAAAAA (81) 78.6 0.0786 Cb medulloblastoma GAAACATTCT (7) 2.3 0.0023 P8 GC+1d culture TGAAAAAAAA (81) 26.3 0.0263 P8 GC+1d culture TATTTAAGAG (2) 3.4 0.0034 P8 GC+1d culture TAACTCTTGC (4) 2.3 0.0023 P8 GC+1d culture TTTTGTCCCT (4) 1.1 0.0011 P8 GC+SHH+1d culture TGAAAAAAAA (81) 57.4 0.0574 P8 GC+SHH+1d culture TAACTCTTGC (4) 3.5 0.0035 P8 GC+SHH+1d culture TGAATAAAAA (5) 3.5 0.0035 P8 GC+SHH+1d culture GAAACATTCT (7) 1.2 0.0012 P8 GC+SHH+1d culture TATTTAAGAG (2) 1.2 0.0012 3T3 fibroblasts TGAAAAAAAA (81) 7 0.007 E15 cortex TGAAAAAAAA (81) 29.7 0.0297 P1 cortex GAAACATTCT (7) 4.5 0.0045 P1 cortex TGAAAAAAAA (81) 4.5 0.0045 Hypothalamus TGAAAAAAAA (81) 36.2 0.0362 Hypothalamus TATTTAAGAG (2) 3.6 0.0036 Hypothalamus TGAATAAAAA (5) 1.8 0.0018 E12.5 retina TGAAAAAAAA (81) 31.9 0.0319 E12.5 retina TATTTAAGAG (2) 1.9 0.0019 E12.5 retina TTTTGTCCCT (4) 1.9 0.0019 E14.5 retina TGAAAAAAAA (81) 49.2 0.0492 E14.5 retina TATTTAAGAG (2) 7.3 0.0073 E14.5 retina GAAACATTCT (7) 1.8 0.0018 E14.5 retina TAACTCTTGC (4) 1.8 0.0018 E16.5 retina TGAAAAAAAA (81) 16.3 0.0163 E16.5 retina GAAACATTCT (7) 1.8 0.0018 E16.5 retina TATTTAAGAG (2) 1.8 0.0018 E16.5 retina TGAATAAAAA (5) 1.8 0.0018 E18.5 retina TGAAAAAAAA (81) 74.6 0.0746 E18.5 retina TAACTCTTGC (4) 1.8 0.0018 E18.5 retina TGAATAAAAA (5) 1.8 0.0018 E18.5 retina TTTTGTCCCT (4) 1.8 0.0018 P0.5 retina TGAAAAAAAA (81) 15.7 0.0157 P0.5 retina TAACTCTTGC (4) 2 0.002 P0.5 retina TTTTGTCCCT (4) 2 0.002 P2.5 retina TGAAAAAAAA (81) 42.2 0.0422 P2.5 retina TAACTCTTGC (4) 5.3 0.0053 P2.5 retina TGAATAAAAA (5) 1.8 0.0018 P4.5 retina TGAAAAAAAA (81) 43.6 0.0436 P4.5 retina TAACTCTTGC (4) 4 0.004 P4.5 retina GAAACATTCT (7) 2 0.002 P4.5 retina TATTTAAGAG (2) 2 0.002 P4.5 retina TGAATAAAAA (5) 2 0.002 P4.5 retina TTTTGTCCCT (4) 2 0.002 P6.5 retina TGAAAAAAAA (81) 33.3 0.0333 P6.5 retina TATTTAAGAG (2) 1.7 0.0017 P6.5 retina TGAATAAAAA (5) 1.7 0.0017 P10.5 crx- retina TGAAAAAAAA (81) 9.3 0.0093 P10.5 crx- retina TTTTGTCCCT (4) 5.6 0.0056 P10.5 crx- retina GAAACATTCT (7) 1.9 0.0019 P10.5 crx- retina TATTTAAGAG (2) 1.9 0.0019 P10.5 crx+ retina TGAAAAAAAA (81) 19.2 0.0192 P10.5 crx+ retina TAACTCTTGC (4) 5.8 0.0058 P10.5 crx+ retina GAAACATTCT (7) 3.8 0.0038 P10.5 crx+ retina TGAATAAAAA (5) 1.9 0.0019 Adult retinal TGAAAAAAAA (81) 13 0.013 ONL TGAAAAAAAA (81) 19.2 0.0192 ONL TATTTAAGAG (2) 1.9 0.0019 ONL TGAATAAAAA (5) 1.9 0.0019