Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.258633	Stip1	stress-induced phosphoprotein 1	19		20867
Gene Ontology	Golgi apparatus | nucleus | response to stress
Human Homolog	STIP1[stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing protein)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 110 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTCTCTTCAC 4.9 0.0049 P8 Cb GC GTGGCACACG (29) 4.9 0.0049 P8 Cb GC TATAAATATA (4) 3.3 0.0033 P8 Cb GC CTGCTCTACA (4) 1.6 0.0016 P8 Cb GC GAGTTTGTCC (4) 1.6 0.0016 P8 Cb GC GATGAGGAGG (3) 1.6 0.0016 P8 Cb GC GGATGAAAAA (9) 1.6 0.0016 Cb medulloblastoma GTCTCTTCAC 6.9 0.0069 Cb medulloblastoma AGTGGCAAGA (2) 2.3 0.0023 Cb medulloblastoma CCTACAAGGA (3) 2.3 0.0023 Cb medulloblastoma CTGCTCTACA (4) 2.3 0.0023 Cb medulloblastoma GACTACATAA (6) 2.3 0.0023 Cb medulloblastoma GATGAGGAGG (3) 2.3 0.0023 Cb medulloblastoma GTGGCACACG (29) 2.3 0.0023 P8 GC+1d culture GTCTCTTCAC 2.3 0.0023 P8 GC+1d culture CGTGTGCTGG (2) 1.1 0.0011 P8 GC+1d culture CTAGGCAAAT (6) 1.1 0.0011 P8 GC+1d culture CTGCTCTACA (4) 1.1 0.0011 P8 GC+1d culture GGATGAAAAA (9) 1.1 0.0011 P8 GC+1d culture GTGGCACACG (29) 1.1 0.0011 P8 GC+1d culture TATAAATATA (4) 1.1 0.0011 P8 GC+SHH+1d culture GTCTCTTCAC 10.5 0.0105 P8 GC+SHH+1d culture GTGGCACACG (29) 7 0.007 P8 GC+SHH+1d culture AGTGGCAAGA (2) 1.2 0.0012 P8 GC+SHH+1d culture CCTACAAGGA (3) 1.2 0.0012 P8 GC+SHH+1d culture CTGCTCTACA (4) 1.2 0.0012 P8 GC+SHH+1d culture TATAAATATA (4) 1.2 0.0012 3T3 fibroblasts GTGGCACACG (29) 35 0.035 3T3 fibroblasts GTCTCTTCAC 7 0.007 E15 cortex GTGGCACACG (29) 69.3 0.0693 E15 cortex GCTGACCCTG (2) 9.9 0.0099 E15 cortex GTCTCTTCAC 4.9 0.0049 P1 cortex GTCTCTTCAC 9.1 0.0091 P1 cortex GTGGCACACG (29) 9.1 0.0091 P1 cortex CTAGGCAAAT (6) 4.5 0.0045 P1 cortex CTGCTCTACA (4) 4.5 0.0045 P1 cortex GAAGGACTAT (3) 4.5 0.0045 P1 cortex GTTCACACAG (3) 4.5 0.0045 Hypothalamus GTCTATTTAC (3) 5.4 0.0054 Hypothalamus CTGCTCTACA (4) 3.6 0.0036 Hypothalamus GAAGGACTAT (3) 1.8 0.0018 Hypothalamus GTCTCTTCAC 1.8 0.0018 E12.5 retina GTGGCACACG (29) 13.1 0.0131 E12.5 retina GTCTCTTCAC 11.3 0.0113 E12.5 retina GTCTATTTAC (3) 3.8 0.0038 E12.5 retina TATAAATATA (4) 3.8 0.0038 E12.5 retina AATCATTCAA (4) 1.9 0.0019 E12.5 retina CCTACAAGGA (3) 1.9 0.0019 E12.5 retina CTGCTCTACA (4) 1.9 0.0019 E12.5 retina GACTACATAA (6) 1.9 0.0019 E12.5 retina GTTCACACAG (3) 1.9 0.0019 E14.5 retina GTGGCACACG (29) 18.2 0.0182 E14.5 retina AATCATTCAA (4) 3.6 0.0036 E14.5 retina CTGCTCTACA (4) 3.6 0.0036 E14.5 retina CGTGTGCTGG (2) 1.8 0.0018 E14.5 retina GAGTTTGTCC (4) 1.8 0.0018 E14.5 retina GTCTATTTAC (3) 1.8 0.0018 E14.5 retina GTCTCTTCAC 1.8 0.0018 E16.5 retina GTGGCACACG (29) 5.4 0.0054 E16.5 retina AGTGGCAAGA (2) 1.8 0.0018 E16.5 retina CGTGTGCTGG (2) 1.8 0.0018 E16.5 retina CTGCTCTACA (4) 1.8 0.0018 E16.5 retina GCTGACCCTG (2) 1.8 0.0018 E18.5 retina GTGGCACACG (29) 3.6 0.0036 E18.5 retina AATCATTCAA (4) 1.8 0.0018 E18.5 retina AGTGGCAAGA (2) 1.8 0.0018 E18.5 retina GAGGCCAGGT (3) 1.8 0.0018 E18.5 retina GGATGAAAAA (9) 1.8 0.0018 E18.5 retina TATAAATATA (4) 1.8 0.0018 P0.5 retina GTCTCTTCAC 7.9 0.0079 P0.5 retina GTGGCACACG (29) 5.9 0.0059 P0.5 retina AATCATTCAA (4) 3.9 0.0039 P0.5 retina CTGCTCTACA (4) 2 0.002 P0.5 retina GACTACATAA (6) 2 0.002 P2.5 retina GTCTCTTCAC 8.8 0.0088 P2.5 retina GTGGCACACG (29) 8.8 0.0088 P2.5 retina AATCATTCAA (4) 1.8 0.0018 P2.5 retina CTAGGCAAAT (6) 1.8 0.0018 P2.5 retina TATAAATATA (4) 1.8 0.0018 P4.5 retina GTGGCACACG (29) 13.9 0.0139 P4.5 retina GTCTCTTCAC 4 0.004 P4.5 retina GAAGGACTAT (3) 2 0.002 P4.5 retina GTTCACACAG (3) 2 0.002 P6.5 retina CTGCTCTACA (4) 10 0.01 P6.5 retina GTGGCACACG (29) 6.7 0.0067 P6.5 retina GAGTTTGTCC (4) 1.7 0.0017 P6.5 retina GATGAGGAGG (3) 1.7 0.0017 P6.5 retina GTCTATTTAC (3) 1.7 0.0017 P6.5 retina GTTCACACAG (3) 1.7 0.0017 P10.5 crx- retina GTCTCTTCAC 5.6 0.0056 P10.5 crx- retina CTGCTCTACA (4) 3.7 0.0037 P10.5 crx- retina AGTGGCAAGA (2) 1.9 0.0019 P10.5 crx- retina GAGTTTGTCC (4) 1.9 0.0019 P10.5 crx- retina GTGGCACACG (29) 1.9 0.0019 P10.5 crx- retina TATAAATATA (4) 1.9 0.0019 P10.5 crx+ retina GTGGCACACG (29) 9.6 0.0096 P10.5 crx+ retina CTGCTCTACA (4) 7.7 0.0077 P10.5 crx+ retina GTCTCTTCAC 3.8 0.0038 P10.5 crx+ retina GACTACATAA (6) 1.9 0.0019 Adult retinal GTGGCACACG (29) 13 0.013 Adult retinal CTGCTCTACA (4) 5.6 0.0056 Adult retinal GTCTCTTCAC 5.6 0.0056 Adult retinal AATCATTCAA (4) 1.9 0.0019 ONL GTCTCTTCAC 7.7 0.0077 ONL GTGGCACACG (29) 7.7 0.0077 ONL CGTGTGCTGG (2) 1.9 0.0019 ONL CTGCTCTACA (4) 1.9 0.0019 ONL GAGGCCAGGT (3) 1.9 0.0019 ONL GGATGAAAAA (9) 1.9 0.0019 ONL TATAAATATA (4) 1.9 0.0019