Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.258785	Copg	coatomer protein complex, subunit gamma	6	6 38.0 cM	54161
Gene Ontology	Golgi apparatus | intracellular protein transport | membrane | protein transport | protein transporter activity | structural molecule activity | transport | viral capsid
Human Homolog	COPG[coatomer protein complex, subunit gamma]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 94 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGGAGAAGA (8) 63.6 0.0636 P8 Cb GC CCTGCAAGGA (4) 9.8 0.0098 P8 Cb GC GAGCTTTCAT 3.3 0.0033 P8 Cb GC CAGTGGTGAA (5) 1.6 0.0016 P8 Cb GC TTTTCTGGAA (8) 1.6 0.0016 Cb medulloblastoma GAGGAGAAGA (8) 50.9 0.0509 Cb medulloblastoma CTGAAGAGAA (7) 18.5 0.0185 Cb medulloblastoma CCTGCAAGGA (4) 11.6 0.0116 Cb medulloblastoma TTTTCTGGAA (8) 4.6 0.0046 P8 GC+1d culture GAGGAGAAGA (8) 57.1 0.0571 P8 GC+1d culture CCTGCAAGGA (4) 8 0.008 P8 GC+1d culture TTTTCTGGAA (8) 2.3 0.0023 P8 GC+1d culture AACTTCCTGT (3) 1.1 0.0011 P8 GC+1d culture CAGTGGTGAA (5) 1.1 0.0011 P8 GC+1d culture GAGCTTTCAT 1.1 0.0011 P8 GC+1d culture TTGAAGAAAT (5) 1.1 0.0011 P8 GC+SHH+1d culture GAGGAGAAGA (8) 76.1 0.0761 P8 GC+SHH+1d culture CCTGCAAGGA (4) 5.9 0.0059 P8 GC+SHH+1d culture CAGTGGTGAA (5) 2.3 0.0023 P8 GC+SHH+1d culture AACTTCCTGT (3) 1.2 0.0012 P8 GC+SHH+1d culture TTTTCTGGAA (8) 1.2 0.0012 3T3 fibroblasts CCTGCAAGGA (4) 21 0.021 3T3 fibroblasts GAGGAGAAGA (8) 7 0.007 3T3 fibroblasts AACTTCCTGT (3) 3.5 0.0035 E15 cortex GAGGAGAAGA (8) 14.8 0.0148 E15 cortex TTTTCTGGAA (8) 14.8 0.0148 E15 cortex AACTTCCTGT (3) 4.9 0.0049 E15 cortex CAGTGGTGAA (5) 4.9 0.0049 E15 cortex CCTGCAAGGA (4) 4.9 0.0049 P1 cortex GAGGAGAAGA (8) 9.1 0.0091 P1 cortex AACTTCCTGT (3) 4.5 0.0045 Hypothalamus GAGGAGAAGA (8) 83.3 0.0833 Hypothalamus TTTTCTGGAA (8) 5.4 0.0054 Hypothalamus CAGTGGTGAA (5) 3.6 0.0036 Hypothalamus CCTGCAAGGA (4) 3.6 0.0036 E12.5 retina GAGGAGAAGA (8) 242.2 0.2422 E12.5 retina CCTGCAAGGA (4) 3.8 0.0038 E12.5 retina GAGCTTTCAT 1.9 0.0019 E12.5 retina TGCATACAGT (3) 1.9 0.0019 E12.5 retina TTTTCTGGAA (8) 1.9 0.0019 E14.5 retina GAGGAGAAGA (8) 91.1 0.0911 E14.5 retina TTTTCTGGAA (8) 5.5 0.0055 E14.5 retina CCTGCAAGGA (4) 1.8 0.0018 E16.5 retina GAGGAGAAGA (8) 77.9 0.0779 E16.5 retina CCTGCAAGGA (4) 5.4 0.0054 E16.5 retina CAGTGGTGAA (5) 3.6 0.0036 E16.5 retina TTTTCTGGAA (8) 3.6 0.0036 E16.5 retina AACTTCCTGT (3) 1.8 0.0018 E18.5 retina GAGGAGAAGA (8) 72.8 0.0728 E18.5 retina TTTTCTGGAA (8) 5.5 0.0055 E18.5 retina CCTGCAAGGA (4) 1.8 0.0018 E18.5 retina TTGAAGAAAT (5) 1.8 0.0018 P0.5 retina GAGGAGAAGA (8) 74.6 0.0746 P0.5 retina CCTGCAAGGA (4) 7.9 0.0079 P0.5 retina CAGTGGTGAA (5) 3.9 0.0039 P0.5 retina TGCATACAGT (3) 2 0.002 P2.5 retina GAGGAGAAGA (8) 72.2 0.0722 P2.5 retina CCTGCAAGGA (4) 12.3 0.0123 P2.5 retina TTTTCTGGAA (8) 7 0.007 P2.5 retina CAGTGGTGAA (5) 1.8 0.0018 P2.5 retina TGCATACAGT (3) 1.8 0.0018 P4.5 retina GAGGAGAAGA (8) 91.1 0.0911 P4.5 retina CCTGCAAGGA (4) 19.8 0.0198 P4.5 retina AACTTCCTGT (3) 2 0.002 P4.5 retina AGCCGAGAAG (3) 2 0.002 P4.5 retina CAGTGGTGAA (5) 2 0.002 P4.5 retina GAGCTTTCAT 2 0.002 P4.5 retina TGCATACAGT (3) 2 0.002 P4.5 retina TTGAAGAAAT (5) 2 0.002 P6.5 retina GAGGAGAAGA (8) 45 0.045 P6.5 retina CCTGCAAGGA (4) 11.7 0.0117 P6.5 retina CAGAGTGAAC (3) 3.3 0.0033 P6.5 retina CAGTGGTGAA (5) 1.7 0.0017 P6.5 retina GAGCTTTCAT 1.7 0.0017 P6.5 retina TTTTCTGGAA (8) 1.7 0.0017 P10.5 crx- retina GAGGAGAAGA (8) 31.6 0.0316 P10.5 crx- retina CCTGCAAGGA (4) 11.1 0.0111 P10.5 crx- retina TTTTCTGGAA (8) 7.4 0.0074 P10.5 crx- retina AACTTCCTGT (3) 5.6 0.0056 P10.5 crx- retina CAGTGGTGAA (5) 1.9 0.0019 P10.5 crx+ retina GAGGAGAAGA (8) 51.9 0.0519 P10.5 crx+ retina CCTGCAAGGA (4) 13.5 0.0135 P10.5 crx+ retina CAGAGTGAAC (3) 1.9 0.0019 P10.5 crx+ retina TTGAAGAAAT (5) 1.9 0.0019 P10.5 crx+ retina TTTTCTGGAA (8) 1.9 0.0019 Adult retinal GAGGAGAAGA (8) 40.7 0.0407 Adult retinal CAGTGGTGAA (5) 9.3 0.0093 Adult retinal AGCCGAGAAG (3) 3.7 0.0037 Adult retinal CCTGCAAGGA (4) 3.7 0.0037 Adult retinal AACTTCCTGT (3) 1.9 0.0019 Adult retinal TTTTCTGGAA (8) 1.9 0.0019 ONL GAGGAGAAGA (8) 34.5 0.0345 ONL CAGAGTGAAC (3) 1.9 0.0019 ONL TTTTCTGGAA (8) 1.9 0.0019